PDB entry 2q1w

View 2q1w on RCSB PDB site
Description: Crystal structure of the Bordetella bronchiseptica enzyme WbmH in complex with NAD+
Class: Sugar Binding Protein
Keywords: ROSSMANN FOLD, PROTEIN-NAD COMPLEX, Sugar Binding Protein
Deposited on 2007-05-25, released 2007-10-02
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-11-12, with a file datestamp of 2014-11-07.
Experiment type: XRAY
Resolution: 2.19 Å
R-factor: 0.179
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative nucleotide sugar epimerase/ dehydratase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BbLPS1.14, wbmH
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2q1wa_
  • Chain 'B':
    Compound: Putative nucleotide sugar epimerase/ dehydratase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BbLPS1.14, wbmH
    Database cross-references and differences (RAF-indexed):
    • Uniprot O87987 (20-End)
      • expression tag (19)
    Domains in SCOPe 2.05: d2q1wb_
  • Chain 'C':
    Compound: Putative nucleotide sugar epimerase/ dehydratase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BbLPS1.14, wbmH
    Database cross-references and differences (RAF-indexed):
    • Uniprot O87987 (20-End)
      • expression tag (19)
    Domains in SCOPe 2.05: d2q1wc_
  • Heterogens: NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2q1wA (A:)
mgsshhhhhhssglvprgshmkkvfitgicgqigshiaelllergdkvvgidnfatgrre
hlkdhpnltfvegsiadhalvnqligdlqpdavvhtaasykdpddwyndtltncvggsnv
vqaakknnvgrfvyfqtalcygvkpiqqpvrldhprnpanssyaisksanedyleysgld
fvtfrlanvvgprnvsgplpiffqrlsegkkcfvtkarrdfvfvkdlaratvravdgvgh
gayhfssgtdvaikelydavveamalpsypepeirelgpddapsilldpsrtiqdfgkie
ftplketvaaavayfreygvsggythlkinenk

    Sequence, based on observed residues (ATOM records): (download) 
    >2q1wA (A:)
mkkvfitgicgqigshiaelllergdkvvgidnfatgrrehlkdhpnltfvegsiadhal
vnqligdlqpdavvhtaasykdpddwyndtltncvggsnvvqaakknnvgrfvyfqtalc
ygvkpiqqpvrldhprnpanssyaisksanedyleysgldfvtfrlanvvgprnvsgplp
iffqrlsegkkcfvtkarrdfvfvkdlaratvravdgvghgayhfssgtdvaikelydav
veamalpsypepeirelgpddapsilldpsrtiqdfgkieftplketvaaavayfreygv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2q1wB (B:)
mgsshhhhhhssglvprgshmkkvfitgicgqigshiaelllergdkvvgidnfatgrre
hlkdhpnltfvegsiadhalvnqligdlqpdavvhtaasykdpddwyndtltncvggsnv
vqaakknnvgrfvyfqtalcygvkpiqqpvrldhprnpanssyaisksanedyleysgld
fvtfrlanvvgprnvsgplpiffqrlsegkkcfvtkarrdfvfvkdlaratvravdgvgh
gayhfssgtdvaikelydavveamalpsypepeirelgpddapsilldpsrtiqdfgkie
ftplketvaaavayfreygvsggythlkinenk

    Sequence, based on observed residues (ATOM records): (download) 
    >2q1wB (B:)
hmkkvfitgicgqigshiaelllergdkvvgidnfatgrrehlkdhpnltfvegsiadha
lvnqligdlqpdavvhtaasykdpddwyndtltncvggsnvvqaakknnvgrfvyfqtal
cygvkpiqqpvrldhprnpanssyaisksanedyleysgldfvtfrlanvvgprnvsgpl
piffqrlsegkkcfvtkarrdfvfvkdlaratvravdgvghgayhfssgtdvaikelyda
vveamalpsypepeirelddapsilldpsrtiqdfgkieftplketvaaavayfreygv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2q1wC (C:)
mgsshhhhhhssglvprgshmkkvfitgicgqigshiaelllergdkvvgidnfatgrre
hlkdhpnltfvegsiadhalvnqligdlqpdavvhtaasykdpddwyndtltncvggsnv
vqaakknnvgrfvyfqtalcygvkpiqqpvrldhprnpanssyaisksanedyleysgld
fvtfrlanvvgprnvsgplpiffqrlsegkkcfvtkarrdfvfvkdlaratvravdgvgh
gayhfssgtdvaikelydavveamalpsypepeirelgpddapsilldpsrtiqdfgkie
ftplketvaaavayfreygvsggythlkinenk

    Sequence, based on observed residues (ATOM records): (download) 
    >2q1wC (C:)
hmkkvfitgicgqigshiaelllergdkvvgidnfatgrrehlkdhpnltfvegsiadha
lvnqligdlqpdavvhtaasykdpddwyndtltncvggsnvvqaakknnvgrfvyfqtal
cygvkpiqqpvrldhprnpanssyaisksanedyleysgldfvtfrlanvvgprnsgplp
iffqrlsegkkcfvtkarrdfvfvkdlaratvravdgvghgayhfssgtdvaikelydav
veamalpsypepeirelgapsilldpsrtiqdfgkieftplketvaaavayfreyg