PDB entry 2pkq
View 2pkq on RCSB PDB site
Description: Crystal structure of the photosynthetic A2B2-glyceraldehyde-3-phosphate dehydrogenase, complexed with NADP
Class: oxidoreductase
Keywords: Rossman fold, protein-NADP complex
Deposited on
2007-04-18, released
2007-06-19
The last revision prior to the SCOP 1.73 freeze date was dated
2007-06-19, with a file datestamp of
2007-06-15.
Experiment type: XRAY
Resolution: 3.6 Å
R-factor: 0.261
AEROSPACI score: 0.09
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'O':
Compound: Glyceraldehyde-3-phosphate dehydrogenase B
Species: Spinacia oleracea
- Chain 'P':
Compound: glyceraldehyde-3-phosphate dehydrogenase a
Species: Spinacia oleracea
Domains in SCOP 1.73: d2pkqp1, d2pkqp2 - Chain 'Q':
Compound: Glyceraldehyde-3-phosphate dehydrogenase B
Species: Spinacia oleracea
- Chain 'R':
Compound: glyceraldehyde-3-phosphate dehydrogenase a
Species: Spinacia oleracea
Domains in SCOP 1.73: d2pkqr1, d2pkqr2 - Chain 'S':
Compound: glyceraldehyde-3-phosphate dehydrogenase a
Species: Spinacia oleracea
Domains in SCOP 1.73: d2pkqs1, d2pkqs2 - Chain 'T':
Compound: Glyceraldehyde-3-phosphate dehydrogenase B
Species: Spinacia oleracea
- Heterogens: SO4, NDP
PDB Chain Sequences:
- Chain 'O':
No sequence available.
- Chain 'P':
Sequence; same for both SEQRES and ATOM records: (download)
>2pkqP (P:)
klkvaingfgrigrnflrcwhgrkdspldvvvindtggvkqashllkydsilgtfdadvk
tagdsaisvdgkvikvvsdrnpvnlpwgdmgidlviegtgvfvdrdgagkhlqagakkvl
itapgkgdiptyvvgvneegythadtiisnascttnclapfvkvldqkfgiikgtmttth
sytgdqrlldashrdlrraraaclnivptstgaakavalvlpnlkgklngialrvptpnv
svvdlvvqvskktfaeevnaafresadnelkgilsvcdeplvsidfrctdvsstidsslt
mvmgddmvkviawydnewgysqrvvdladivankwqa
- Chain 'Q':
No sequence available.
- Chain 'R':
Sequence; same for both SEQRES and ATOM records: (download)
>2pkqR (R:)
klkvaingfgrigrnflrcwhgrkdspldvvvindtggvkqashllkydsilgtfdadvk
tagdsaisvdgkvikvvsdrnpvnlpwgdmgidlviegtgvfvdrdgagkhlqagakkvl
itapgkgdiptyvvgvneegythadtiisnascttnclapfvkvldqkfgiikgtmttth
sytgdqrlldashrdlrraraaclnivptstgaakavalvlpnlkgklngialrvptpnv
svvdlvvqvskktfaeevnaafresadnelkgilsvcdeplvsidfrctdvsstidsslt
mvmgddmvkviawydnewgysqrvvdladivankwqa
- Chain 'S':
Sequence, based on SEQRES records: (download)
>2pkqS (S:)
klkvaingfgrigrnflrcwhgrkdspldvvvindtggvkqashllkydsilgtfdadvk
tagdsaisvdgkvikvvsdrnpvnlpwgdmgidlviegtgvfvdrdgagkhlqagakkvl
itapgkgdiptyvvgvneegythadtiisnascttnclapfvkvldqkfgiikgtmttth
sytgdqrlldashrdlrraraaclnivptstgaakavalvlpnlkgklngialrvptpnv
svvdlvvqvskktfaeevnaafresadnelkgilsvcdeplvsidfrctdvsstidsslt
mvmgddmvkviawydnewgysqrvvdladivankwqa
Sequence, based on observed residues (ATOM records): (download)
>2pkqS (S:)
klkvaingfgrigrnflrcwhgrkdspldvvvindtggvkqashllkydsilgtfdadvk
tagdsaisvdgkvikvvsdrnpvnlpwgdmgidlviegtgvfvdrdgagkhlqagakkvl
itapgkgdiptyvvgvneegythadtiisnascttnclapfvkvldqkfgiikgtmttth
sytgdqrlldashrdlrraraaclnivptstgaakavalvlpnlkgklngialrvptpnv
svvdlvvqvskktfaeevnaafresadnelkgilsvcdeplvsidfrctdvsstidsslt
mvmgddmvkviawydnewgysqrvvdladivankwq
- Chain 'T':
No sequence available.