PDB entry 2pb2

View 2pb2 on RCSB PDB site
Description: Structure of biosynthetic N-acetylornithine aminotransferase from Salmonella typhimurium: studies on substrate specificity and inhibitor binding
Class: Transferase
Keywords: ArgD, Pyridoxal 5'-phosphate, Arginine metabolism, Lysine biosynthesis, Gabaculine, Transferase
Deposited on 2007-03-28, released 2007-12-25
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.91 Å
R-factor: 0.198
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Acetylornithine/succinyldiaminopimelate aminotransferase
    Species: SALMONELLA TYPHIMURIUM [TaxId:99287]
    Gene: argD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2pb2a_
  • Chain 'B':
    Compound: Acetylornithine/succinyldiaminopimelate aminotransferase
    Species: SALMONELLA TYPHIMURIUM [TaxId:99287]
    Gene: argD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2pb2b_
  • Heterogens: PLP, EDO, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2pb2A (A:)
mrgshhhhhhgmashmateqtaitratfdevilpvyapadfipvkgkgsrvwdqqgkeyi
dfaggiavtalghchpalvealksqgetlwhtsnvftnepalrlgrklidatfaervlfm
nsgteanetafklarhyacvrhspfktkiiafhnafhgrslftvsvggqpkysdgfgpkp
adiihvpfndlhavkavmddhtcavvvepiqgeggvqaatpeflkglrdlcdehqallvf
devqcgmgrtgdlfaymhygvtpdiltsakalgggfpvsamlttqeiasafhvgshgsty
ggnplacavagaafdiintpevlqgihtkrqqfvqhlqaideqfdifsdirgmglligae
lkpkykgrardflyagaeagvmvlnagadvmrfapslvveeadihegmqrfaqavgkvva

    Sequence, based on observed residues (ATOM records): (download) 
    >2pb2A (A:)
adfipvkgkgsrvwdqqgkeyidfaggiavtalghchpalvealksqgetlwhtsnvftn
epalrlgrklidatfaervlfmnsgteanetafklarhyacvrhspfktkiiafhnafhg
rslftvsvggqpkysdgfgpkpadiihvpfndlhavkavmddhtcavvvepiqgeggvqa
atpeflkglrdlcdehqallvfdevqcgmgrtgdlfaymhygvtpdiltsakalgggfpv
samlttqeiasafhgstyggnplacavagaafdiintpevlqgihtkrqqfvqhlqaide
qfdifsdirgmglligaelkpkykgrardflyagaeagvmvlnagadvmrfapslvveea
dihegmqrfaqavgkvva

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2pb2B (B:)
mrgshhhhhhgmashmateqtaitratfdevilpvyapadfipvkgkgsrvwdqqgkeyi
dfaggiavtalghchpalvealksqgetlwhtsnvftnepalrlgrklidatfaervlfm
nsgteanetafklarhyacvrhspfktkiiafhnafhgrslftvsvggqpkysdgfgpkp
adiihvpfndlhavkavmddhtcavvvepiqgeggvqaatpeflkglrdlcdehqallvf
devqcgmgrtgdlfaymhygvtpdiltsakalgggfpvsamlttqeiasafhvgshgsty
ggnplacavagaafdiintpevlqgihtkrqqfvqhlqaideqfdifsdirgmglligae
lkpkykgrardflyagaeagvmvlnagadvmrfapslvveeadihegmqrfaqavgkvva

    Sequence, based on observed residues (ATOM records): (download) 
    >2pb2B (B:)
lpvyapadfipvkgkgsrvwdqqgkeyidfaggiavtalghchpalvealksqgetlwht
snvftnepalrlgrklidatfaervlfmnsgteanetafklarhyacvrhspfktkiiaf
hnafhgrslftvsvggqpkysdgfgpkpadiihvpfndlhavkavmddhtcavvvepiqg
eggvqaatpeflkglrdlcdehqallvfdevqcgmgrtgdlfaymhygvtpdiltsakal
gggfpvsamlttqeiasafstyggnplacavagaafdiintpevlqgihtkrqqfvqhlq
aideqfdifsdirgmglligaelkpkykgrardflyagaeagvmvlnagadvmrfapslv
veeadihegmqrfaqavgkvva