SCOPe 2.06: Structural Classification of Proteins

PDB entry 2oqh

View 2oqh on RCSB PDB site
Description: Crystal structure of an isomerase from Streptomyces coelicolor A3(2)
Class: isomerase
Keywords: 9291a, PSI-II, PSI-2, NYSGXRC, isomerase, enolase, tim barrel, Structural Genomics, Protein Structure Initiative, New York SGX Research Center for Structural Genomics
Deposited on 2007-01-31, released 2007-02-20
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.98 Å
R-factor: 0.205
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Putative isomerase
Species: Streptomyces coelicolor [TaxId:100226]
Gene: SCO7570, SC5F1.24
Database cross-references and differences (RAF-indexed):
- Uniprot Q9F3A5 (3-End)
  - cloning artifact (1-2)
  - modified residue (50)
  - modified residue (62)
  - modified residue (83)
  - modified residue (107)
  - modified residue (150)
  - modified residue (231)
  - modified residue (246)
  - modified residue (258)
  - modified residue (293)
  - modified residue (325)
Domains in SCOPe 2.06: d2oqha1, d2oqha2, d2oqha3
Chain 'B':
Compound: Putative isomerase
Species: Streptomyces coelicolor [TaxId:100226]
Gene: SCO7570, SC5F1.24
Database cross-references and differences (RAF-indexed):
- Uniprot Q9F3A5 (3-End)
  - cloning artifact (2)
  - modified residue (50)
  - modified residue (62)
  - modified residue (83)
  - modified residue (107)
  - modified residue (150)
  - modified residue (231)
  - modified residue (246)
  - modified residue (258)
  - modified residue (293)
  - modified residue (325)
Domains in SCOPe 2.06: d2oqhb1, d2oqhb2, d2oqhb3
Chain 'C':
Compound: Putative isomerase
Species: Streptomyces coelicolor [TaxId:100226]
Gene: SCO7570, SC5F1.24
Database cross-references and differences (RAF-indexed):
- Uniprot Q9F3A5 (3-End)
  - cloning artifact (1-2)
  - modified residue (50)
  - modified residue (62)
  - modified residue (83)
  - modified residue (107)
  - modified residue (150)
  - modified residue (231)
  - modified residue (246)
  - modified residue (258)
  - modified residue (293)
  - modified residue (325)
Domains in SCOPe 2.06: d2oqhc1, d2oqhc2, d2oqhc3
Chain 'D':
Compound: Putative isomerase
Species: Streptomyces coelicolor [TaxId:100226]
Gene: SCO7570, SC5F1.24
Database cross-references and differences (RAF-indexed):
- Uniprot Q9F3A5 (3-End)
  - cloning artifact (1-2)
  - modified residue (50)
  - modified residue (62)
  - modified residue (83)
  - modified residue (107)
  - modified residue (150)
  - modified residue (231)
  - modified residue (246)
  - modified residue (258)
  - modified residue (293)
  - modified residue (325)
Domains in SCOPe 2.06: d2oqhd1, d2oqhd2, d2oqhd3
Heterogens: SO4, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2oqhA (A:)
mslkitdvdvwvvnlplvnpftssfetktgetrtvvrvrtdsgvegwgetmwgapvaaiv
rrmapdligtspfaleafhrkqhmvpffygylgyaaiaavdvacwdamgkatgqsvtdll
ggavrdevpitalitradapgatpadlpkamaehavrvveeggfdavklkgttdcagdva
ilravrealpgvnlrvdpnaawsvpdsvragialeeldleyledpcvgiegmaqvkakvr
iplctnmcvvrfedfapamrlnavdvihgdvykwggiaatkalaahcetfglgmnlhsgg
elgiataahlavvsstpvlsraidsmyylhaddiieplhlengrlrvpsgpglgvsvded
klrhyagvnerdgdltgeghhhhhh

Sequence, based on observed residues (ATOM records): (download)

>2oqhA (A:)
slkitdvdvwvvnlplvnpfgetrtvvrvrtdsgvegwgetmwgapvaaivrrmapdlig
tspfaleafhrkqhmvpffygylgyaaiaavdvacwdamgkatgqsvtdllggavrdevp
italitradapgatpadlpkamaehavrvveeggfdavklkgttdcagdvailravreal
pgvnlrvdpnaawsvpdsvragialeeldleyledpcvgiegmaqvkakvriplctnmcv
vrfedfapamrlnavdvihgdvykwggiaatkalaahcetfglgmnlhsggelgiataah
lavvsstpvlsraidsmyylhaddiieplhlengrlrvpsgpglgvsvdedklrhyagvn

Chain 'B':
Sequence, based on SEQRES records: (download)

>2oqhB (B:)
mslkitdvdvwvvnlplvnpftssfetktgetrtvvrvrtdsgvegwgetmwgapvaaiv
rrmapdligtspfaleafhrkqhmvpffygylgyaaiaavdvacwdamgkatgqsvtdll
ggavrdevpitalitradapgatpadlpkamaehavrvveeggfdavklkgttdcagdva
ilravrealpgvnlrvdpnaawsvpdsvragialeeldleyledpcvgiegmaqvkakvr
iplctnmcvvrfedfapamrlnavdvihgdvykwggiaatkalaahcetfglgmnlhsgg
elgiataahlavvsstpvlsraidsmyylhaddiieplhlengrlrvpsgpglgvsvded
klrhyagvnerdgdltgeghhhhhh

Sequence, based on observed residues (ATOM records): (download)

>2oqhB (B:)
lkitdvdvwvvnlplvnpftssfetktgetrtvvrvrtdsgvegwgetmwgapvaaivrr
mapdligtspfaleafhrkqhmvpffygylgyaaiaavdvacwdamgkatgqsvtdllgg
avrdevpitalitradapgatpadlpkamaehavrvveeggfdavklkgttdcagdvail
ravrealpgvnlrvdpnaawsvpdsvragialeeldleyledpcvgiegmaqvkakvrip
lctnmcvvrfedfapamrlnavdvihgdvykwggiaatkalaahcetfglgmnlhsggel
giataahlavvsstpvlsraidsmyylhaddiieplhlengrlrvpsgpglgvsvdedkl
rhyagvnerdgdlt

Chain 'C':
Sequence, based on SEQRES records: (download)

>2oqhC (C:)
mslkitdvdvwvvnlplvnpftssfetktgetrtvvrvrtdsgvegwgetmwgapvaaiv
rrmapdligtspfaleafhrkqhmvpffygylgyaaiaavdvacwdamgkatgqsvtdll
ggavrdevpitalitradapgatpadlpkamaehavrvveeggfdavklkgttdcagdva
ilravrealpgvnlrvdpnaawsvpdsvragialeeldleyledpcvgiegmaqvkakvr
iplctnmcvvrfedfapamrlnavdvihgdvykwggiaatkalaahcetfglgmnlhsgg
elgiataahlavvsstpvlsraidsmyylhaddiieplhlengrlrvpsgpglgvsvded
klrhyagvnerdgdltgeghhhhhh

Sequence, based on observed residues (ATOM records): (download)

>2oqhC (C:)
slkitdvdvwvvnlplvnpftssfetktgetrtvvrvrtdsgvegwgetmwgapvaaivr
rmapdligtspfaleafhrkqhmvpffygylgyaaiaavdvacwdamgkatgqsvtdllg
gavrdevpitalitradapgatpadlpkamaehavrvveeggfdavklkgttdcagdvai
lravrealpgvnlrvdpnaawsvpdsvragialeeldleyledpcvgiegmaqvkakvri
plctnmcvvrfedfapamrlnavdvihgdvykwggiaatkalaahcetfglgmnlhsgge
lgiataahlavvsstpvlsraidsmyylhaddiieplhlengrlrvpsgpglgvsvdedk
lrhyagvn

Chain 'D':
Sequence, based on SEQRES records: (download)

>2oqhD (D:)
mslkitdvdvwvvnlplvnpftssfetktgetrtvvrvrtdsgvegwgetmwgapvaaiv
rrmapdligtspfaleafhrkqhmvpffygylgyaaiaavdvacwdamgkatgqsvtdll
ggavrdevpitalitradapgatpadlpkamaehavrvveeggfdavklkgttdcagdva
ilravrealpgvnlrvdpnaawsvpdsvragialeeldleyledpcvgiegmaqvkakvr
iplctnmcvvrfedfapamrlnavdvihgdvykwggiaatkalaahcetfglgmnlhsgg
elgiataahlavvsstpvlsraidsmyylhaddiieplhlengrlrvpsgpglgvsvded
klrhyagvnerdgdltgeghhhhhh

Sequence, based on observed residues (ATOM records): (download)

>2oqhD (D:)
slkitdvdvwvvnlplvnpfetktgetrtvvrvrtdsgvegwgetmwgapvaaivrrmap
dligtspfaleafhrkqhmvpffygylgyaaiaavdvacwdamgkatgqsvtdllggavr
devpitalitradapgatpadlpkamaehavrvveeggfdavklkgttdcagdvailrav
realpgvnlrvdpnaawsvpdsvragialeeldleyledpcvgiegmaqvkakvriplct
nmcvvrfedfapamrlnavdvihgdvykwggiaatkalaahcetfglgmnlhsggelgia
taahlavvsstpvlsraidsmyylhaddiieplhlengrlrvpsgpglgvsvdedklrhy
agvnerdgdlt