PDB entry 2oni
View 2oni on RCSB PDB site
Description: Catalytic Domain of the Human NEDD4-like E3 Ligase
Class: ligase
Keywords: ALPHA and BETA PROTEIN (a + b), E3 LIGASE, HECT DOMAIN, UBL-CONJUGATION PATHWAY, STRUCTURAL GENOMICS CONSORTIUM, SGC, LIGASE
Deposited on
2007-01-24, released
2007-04-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.209
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: E3 ubiquitin-protein ligase NEDD4-like protein
Species: Homo sapiens [TaxId:9606]
Gene: NEDD4L, KIAA0439, NEDL3
Database cross-references and differences (RAF-indexed):
- Uniprot Q96PU5 (18-End)
- cloning artifact (13-17)
- modified residue (44)
- modified residue (60)
- modified residue (99)
- modified residue (162-163)
- modified residue (173)
- modified residue (198)
- modified residue (222)
- modified residue (248)
- modified residue (276)
- modified residue (314)
- modified residue (334)
- modified residue (387)
Domains in SCOPe 2.08: d2onia1, d2onia2 - Heterogens: NA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2oniA (A:)
mhhhhhhssgrenlyfqgsrefkqkydyfrkklkkpadipnrfemklhrnnifeesyrri
msvkrpdvlkarlwiefesekgldyggvarewffllskemfnpyyglfeysatdnytlqi
npnsglcnedhlsyftfigrvaglavfhgklldgffirpfykmmlgkqitlndmesvdse
yynslkwilendpteldlmfcideenfgqtyqvdlkpngseimvtnenkreyidlviqwr
fvnrvqkqmnaflegftellpidlikifdenelellmcglgdvdvndwrqhsiykngycp
nhpviqwfwkavllmdaekrirllqfvtgtsrvpmngfaelygsngpqlftieqwgspek
lprahtcfnrldlppyetfedlrekllmaven
Sequence, based on observed residues (ATOM records): (download)
>2oniA (A:)
lyfqgsrefkqkydyfrkklkkpadipnrfemklhrnnifeesyrrimsvkrpdvlkarl
wiefeekgldyggvarewffllskemfnpyyglfeysatdnytlqinpnsglcnedhlsy
ftfigrvaglavfhgklldgffirpfykmmlgkqitlndmesvdseyynslkwilendpt
eldlmfcideenfgqtyqvdlkpngseimvtnenkreyidlviqwrfvnrvqkqmnafle
gftellpidlikifdenelellmcglgdvdvndwrqhsiykngycpnhpviqwfwkavll
mdaekrirllqfvtgtsrvpmngfaelygsngpqlftieqwgspeklprahtcfnrldlp
pyetfedlrekllmave