PDB entry 2o9k

View 2o9k on RCSB PDB site
Description: WDR5 in Complex with Dimethylated H3K4 Peptide
Class: gene regulation
Keywords: wdr5, structural genomics, structural genomics consortium, sgc, gene regulation
Deposited on 2006-12-13, released 2006-12-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.177
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: WD repeat protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: WDR5, BIG3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2o9ka_
  • Chain 'B':
    Compound: H3 histone
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 2O9K (0-End)
  • Chain 'C':
    Compound: WD repeat protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: WDR5, BIG3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2o9kc_
  • Chain 'D':
    Compound: H3 histone
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 2O9K (0-End)
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2o9kA (A:)
gstqskptpvkpnyalkftlaghtkavssvkfspngewlasssadklikiwgaydgkfek
tisghklgisdvawssdsnllvsasddktlkiwdvssgkclktlkghsnyvfccnfnpqs
nlivsgsfdesvriwdvktgkclktlpahsdpvsavhfnrdgslivsssydglcriwdta
sgqclktlidddnppvsfvkfspngkyilaatldntlklwdyskgkclktytghknekyc
ifanfsvtggkwivsgsednlvyiwnlqtkeivqklqghtdvvistachpteniiasaal
endktiklwksdc

    Sequence, based on observed residues (ATOM records): (download) 
    >2o9kA (A:)
vkpnyalkftlaghtkavssvkfspngewlasssadklikiwgaydgkfektisghklgi
sdvawssdsnllvsasddktlkiwdvssgkclktlkghsnyvfccnfnpqsnlivsgsfd
esvriwdvktgkclktlpahsdpvsavhfnrdgslivsssydglcriwdtasgqclktli
dddnppvsfvkfspngkyilaatldntlklwdyskgkclktytghknekycifanfsvtg
gkwivsgsednlvyiwnlqtkeivqklqghtdvvistachpteniiasaalendktiklw
ksdc

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2o9kC (C:)
gstqskptpvkpnyalkftlaghtkavssvkfspngewlasssadklikiwgaydgkfek
tisghklgisdvawssdsnllvsasddktlkiwdvssgkclktlkghsnyvfccnfnpqs
nlivsgsfdesvriwdvktgkclktlpahsdpvsavhfnrdgslivsssydglcriwdta
sgqclktlidddnppvsfvkfspngkyilaatldntlklwdyskgkclktytghknekyc
ifanfsvtggkwivsgsednlvyiwnlqtkeivqklqghtdvvistachpteniiasaal
endktiklwksdc

    Sequence, based on observed residues (ATOM records): (download) 
    >2o9kC (C:)
vkpnyalkftlaghtkavssvkfspngewlasssadklikiwgaydgkfektisghklgi
sdvawssdsnllvsasddktlkiwdvssgkclktlkghsnyvfccnfnpqsnlivsgsfd
esvriwdvktgkclktlpahsdpvsavhfnrdgslivsssydglcriwdtasgqclktli
ddnppvsfvkfspngkyilaatldntlklwdyskgkclktytghknekycifanfsvtgg
kwivsgsednlvyiwnlqtkeivqklqghtdvvistachpteniiasaalendktiklwk
sdc

  • Chain 'D':
    No sequence available.