PDB entry 2nyy

View 2nyy on RCSB PDB site
Description: Crystal structure of botulinum neurotoxin type A complexed with monoclonal antibody CR1
Class: toxin/immune system
Keywords: botulinum, neurotoxin, fab, protein antibody complex, toxin-immune system complex
Deposited on 2006-11-21, released 2006-12-26
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.61 Å
R-factor: 0.208
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Botulinum neurotoxin type A
    Species: Clostridium botulinum [TaxId:1491]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: CR1 monoclonal antibody
    Species: Clostridium botulinum [TaxId:1491]
    Database cross-references and differences (RAF-indexed):
    • PDB 2NYY (0-End)
    Domains in SCOPe 2.03: d2nyyc1, d2nyyc2
  • Chain 'D':
    Compound: CR1 monoclonal antibody
    Species: Clostridium botulinum [TaxId:1491]
    Database cross-references and differences (RAF-indexed):
    • PDB 2NYY
    Domains in SCOPe 2.03: d2nyyd1, d2nyyd2
  • Heterogens: ZN, CA

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2nyyC (C:)
eivltqspatlslspgeratiscrasesvdsyghsfmqwyqqkpgqaprlliyrasnlep
giparfsgsgsgtdftltisslepedfavyycqqgnevpftfgqgtkveikrtvaapsvf
ifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysls
stltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >2nyyC (C:)
eivltqspatlslspgeratiscrasesvdsyghsfmqwyqqkpgqaprlliyrasnlep
giparfsgsgsgtdftltisslepedfavyycqqgnevpftfgqgtkveikrtvaapsvf
ifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysls
stltlskadyekhkvyacevthqglsspvtksfnrg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2nyyD (D:)
qvqlqesggglvqpggslrlscaasgftfkydymywvrqapgkglewvatisdggsytyy
sdsvegrfttsrdnskntlylqmnslraedtaiyycsryryddamdywgqgtlvtvssas
tkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdk

    Sequence, based on observed residues (ATOM records): (download) 
    >2nyyD (D:)
vqlqesggglvqpggslrlscaasgftfkydymywvrqapgkglewvatisdggsytyys
dsvegrfttsrdnskntlylqmnslraedtaiyycsryryddamdywgqgtlvtvssast
kgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgly
slssvvtvpssslgtqtyicnvnhkpsntkvdkkvep