PDB entry 2m5a

View 2m5a on RCSB PDB site
Description: Protein A binding by an engineered Affibody molecule
Class: protein binding
Keywords: binding protein, protein engineering, protein A, Z domain, Affibody molecule, PROTEIN BINDING
Deposited on 2013-02-19, released 2013-08-21
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-10-16, with a file datestamp of 2013-10-11.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.06 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Immunoglobulin G-binding protein A
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: SPA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P38507 (1-57)
      • expression tag (0)
      • conflict (28)
    Domains in SCOPe 2.04: d2m5aa_
  • Chain 'B':
    Compound: ZpA963
    Species: artificial gene [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 2M5A (0-57)
    Domains in SCOPe 2.04: d2m5ab_

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2m5aA (A:)
vdnkfnkeqqnafyeilhlpnlneeqrnafiqslkddpsqsanllaeakklndaqapk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2m5aB (B:)
vdnkfnketqeasweiftlpnlngrqvaafissllddpsqsanllaeakklndaqapk