PDB entry 2ld5

View 2ld5 on RCSB PDB site
Description: Solution NMR-derived complex structure of Hoxa13 DNA binding domain bound to DNA
Class: transcription/DNA
Keywords: TRANSCRIPTION-DNA complex
Deposited on 2011-05-14, released 2011-08-10
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-04-27, with a file datestamp of 2016-04-22.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.04 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Homeobox protein Hox-A13
  Species: Mus musculus [TaxId:10090]
  Gene: Hox-1.10, Hoxa13
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q62424 (4-70)
  Domains in SCOPe 2.07: d2ld5a_
• Chain 'B':
  Compound: DNA (5'-d(*cp*ap*ap*ap*tp*ap*ap*ap*ap*tp*c)-3')
  
• Chain 'C':
  Compound: DNA (5'-d(p*gp*ap*tp*tp*tp*tp*ap*tp*tp*tp*g)-3')
  

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >2ld5A (A:)
  hmlegrkkrvpytkvqlkelereyatnkfitkdkrrrisattnlserqvtiwfqnrrvke
  kkvinklktts
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >2ld5A (A:)
  grkkrvpytkvqlkelereyatnkfitkdkrrrisattnlserqvtiwfqnrrvkekkvi
  nklktts
  

  
  
• Chain 'B':
  No sequence available.
  
  
• Chain 'C':
  No sequence available.