PDB entry 2kdf

View 2kdf on RCSB PDB site
Description: NMR structure of minor S5a (196-306):K48 linked diubiquitin species
Class: protein binding
Keywords: protein complex, ubiquitin interacting motifs, Cytoplasm, Nucleus, Phosphoprotein, Ubl conjugation, Alternative splicing, Proteasome, PROTEIN BINDING
Deposited on 2009-01-06, released 2009-09-01
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-09-01, with a file datestamp of 2009-08-28.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: 26S proteasome non-ATPase regulatory subunit 4
  Species: Homo sapiens [TaxId:9606]
  Gene: PSMD4, MCB1
  Database cross-references and differences (RAF-indexed):
  • Uniprot P55036 (0-110)
• Chain 'B':
  Compound: Ubiquitin
  Species: Homo sapiens [TaxId:9606]
  Gene: RPS27A, UBA80, UBCEP1, UBA52, UBCEP2, UBB, UBC
  Database cross-references and differences (RAF-indexed):
  • Uniprot P62988
  Domains in SCOPe 2.06: d2kdfb_
• Chain 'C':
  Compound: Ubiquitin
  Species: Homo sapiens [TaxId:9606]
  Gene: RPS27A, UBA80, UBCEP1, UBA52, UBCEP2, UBB, UBC
  Database cross-references and differences (RAF-indexed):
  • Uniprot P62988 (0-75)
  Domains in SCOPe 2.06: d2kdfc_

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2kdfB (B:)
  mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
  iqkestlhlvlrlrgg
  

  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2kdfC (C:)
  mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
  iqkestlhlvlrlrgg