PDB entry 2jk0

View 2jk0 on RCSB PDB site
Description: Structural and functional insights into Erwinia carotovora L- asparaginase
Class: hydrolase
Keywords: erwinia, hydrolase, enzyme therapy, protein stability, leukemia treatment
Deposited on 2008-05-23, released 2008-08-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-asparaginase
    Species: Pectobacterium carotovorum [TaxId:554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jk0a_
  • Chain 'B':
    Compound: L-asparaginase
    Species: Pectobacterium carotovorum [TaxId:554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jk0b_
  • Chain 'C':
    Compound: L-asparaginase
    Species: Pectobacterium carotovorum [TaxId:554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jk0c_
  • Chain 'D':
    Compound: L-asparaginase
    Species: Pectobacterium carotovorum [TaxId:554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jk0d_
  • Chain 'E':
    Compound: L-asparaginase
    Species: Pectobacterium carotovorum [TaxId:554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jk0e_
  • Chain 'F':
    Compound: L-asparaginase
    Species: Pectobacterium carotovorum [TaxId:554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jk0f_
  • Chain 'G':
    Compound: L-asparaginase
    Species: Pectobacterium carotovorum [TaxId:554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jk0g_
  • Chain 'H':
    Compound: L-asparaginase
    Species: Pectobacterium carotovorum [TaxId:554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jk0h_
  • Heterogens: ASP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2jk0A (A:)
nlpnivilatggtiagsaaantqttgykagalgvetliqavpelktlanikgeqvasigs
enmtsdvlltlskrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamr
pataisadgpmnlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapee
gylgviigdkiyyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgv
kgivyagmgagsvskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspak
srillmlaltkttnpaviqdyfhay

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2jk0B (B:)
nlpnivilatggtiagsaaantqttgykagalgvetliqavpelktlanikgeqvasigs
enmtsdvlltlskrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamr
pataisadgpmnlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapee
gylgviigdkiyyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgv
kgivyagmgagsvskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspak
srillmlaltkttnpaviqdyfhay

    Sequence, based on observed residues (ATOM records): (download) 
    >2jk0B (B:)
nlpnivilatggtiagsaaalgvetliqavpelktlanikgeqvasigsenmtsdvlltl
skrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamrpataisadgpm
nlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapeegylgviigdki
yyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgvkgivyagmgag
svskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspaksrillmlaltk
ttnpaviqdyfhay

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2jk0C (C:)
nlpnivilatggtiagsaaantqttgykagalgvetliqavpelktlanikgeqvasigs
enmtsdvlltlskrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamr
pataisadgpmnlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapee
gylgviigdkiyyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgv
kgivyagmgagsvskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspak
srillmlaltkttnpaviqdyfhay

    Sequence, based on observed residues (ATOM records): (download) 
    >2jk0C (C:)
nlpnivilatggtiagsaaaalgvetliqavpelktlanikgeqvasigsenmtsdvllt
lskrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamrpataisadgp
mnlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapeegylgviigdk
iyyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgvkgivyagmga
gsvskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspaksrillmlalt
kttnpaviqdyfhay

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2jk0D (D:)
nlpnivilatggtiagsaaantqttgykagalgvetliqavpelktlanikgeqvasigs
enmtsdvlltlskrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamr
pataisadgpmnlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapee
gylgviigdkiyyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgv
kgivyagmgagsvskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspak
srillmlaltkttnpaviqdyfhay

    Sequence, based on observed residues (ATOM records): (download) 
    >2jk0D (D:)
nlpnivilatggtiagsaaantqagalgvetliqavpelktlanikgeqvasigsenmts
dvlltlskrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamrpatai
sadgpmnlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapeegylgv
iigdkiyyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgvkgivy
agmgagsvskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspaksrill
mlaltkttnpaviqdyfhay

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2jk0E (E:)
nlpnivilatggtiagsaaantqttgykagalgvetliqavpelktlanikgeqvasigs
enmtsdvlltlskrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamr
pataisadgpmnlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapee
gylgviigdkiyyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgv
kgivyagmgagsvskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspak
srillmlaltkttnpaviqdyfhay

    Sequence, based on observed residues (ATOM records): (download) 
    >2jk0E (E:)
nlpnivilatggtiagsaagvetliqavpelktlanikgeqvasigsenmtsdvlltlsk
rvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamrpataisadgpmnl
ygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapeegylgviigdkiyy
qtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgvkgivyagmgagsv
skrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspaksrillmlaltktt
npaviqdyfhay

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2jk0F (F:)
nlpnivilatggtiagsaaantqttgykagalgvetliqavpelktlanikgeqvasigs
enmtsdvlltlskrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamr
pataisadgpmnlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapee
gylgviigdkiyyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgv
kgivyagmgagsvskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspak
srillmlaltkttnpaviqdyfhay

    Sequence, based on observed residues (ATOM records): (download) 
    >2jk0F (F:)
nlpnivilatggtiagsaaantalgvetliqavpelktlanikgeqvasigsenmtsdvl
ltlskrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamrpataisad
gpmnlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapeegylgviig
dkiyyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgvkgivyagm
gagsvskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspaksrillmla
ltkttnpaviqdyfhay

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2jk0G (G:)
nlpnivilatggtiagsaaantqttgykagalgvetliqavpelktlanikgeqvasigs
enmtsdvlltlskrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamr
pataisadgpmnlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapee
gylgviigdkiyyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgv
kgivyagmgagsvskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspak
srillmlaltkttnpaviqdyfhay

    Sequence, based on observed residues (ATOM records): (download) 
    >2jk0G (G:)
nlpnivilatggtialgvetliqavpelktlanikgeqvasigsenmtsdvlltlskrvn
ellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamrpataisadgpmnlyga
vkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapeegylgviigdkiyyqtr
ldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgvkgivyagmgagsvskr
gdagirkaeskgivvvrssrtgsgivppdagqpglvadslspaksrillmlaltkttnpa
viqdyfhay

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2jk0H (H:)
nlpnivilatggtiagsaaantqttgykagalgvetliqavpelktlanikgeqvasigs
enmtsdvlltlskrvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamr
pataisadgpmnlygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapee
gylgviigdkiyyqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgv
kgivyagmgagsvskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspak
srillmlaltkttnpaviqdyfhay

    Sequence, based on observed residues (ATOM records): (download) 
    >2jk0H (H:)
nlpnivilatggtiagsgalgvetliqavpelktlanikgeqvasigsenmtsdvlltls
krvnellarsdvdgvvithgtdtldespyflnltvksdkpvvfvaamrpataisadgpmn
lygavkvaadknsrgrgvlvvlndrigsarfisktnastldtfkapeegylgviigdkiy
yqtrldkvhttrsvfdvtnvdklpavdiiygyqddpeymydasikhgvkgivyagmgags
vskrgdagirkaeskgivvvrssrtgsgivppdagqpglvadslspaksrillmlaltkt
tnpaviqdyfhay