PDB entry 2jeg
View 2jeg on RCSB PDB site
Description: the molecular basis of selectivity of nucleoside triphosphate incorporation opposite o6-benzylguanine by sulfolobus solfataricus DNA polymerase IV: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing
Class: transferase
Keywords: DNA replication, mutator protein, 06-benzylguanine, nucleotidyltransferase, DNA-directed DNA polymerase, dpo4, magnesium, polymerase, DNA damage, DNA repair, alkylating agents, translesion synthesis, transferase, DNA-binding, metal-binding
Deposited on
2007-01-17, released
2007-03-13
The last revision prior to the SCOP 1.75 freeze date was dated
2007-03-27, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2.38 Å
R-factor: 0.226
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase IV
Species: SULFOLOBUS SOLFATARICUS
Database cross-references and differences (RAF-indexed):
- PDB 2JEG (6-23)
- Uniprot Q97W02 (6-End)
Domains in SCOP 1.75: d2jega1, d2jega2 - Chain 'P':
Compound: 5'-d(*gp*gp*gp*gp*gp*ap*ap*gp*gp*ap *tp*tp*cp*doc)-3'
- Chain 'T':
Compound: 5'-d(*tp*cp*ap*c bzgp*gp*ap*ap*tp*cp *cp*tp*tp*cp*cp*cp*cp*c)-3'
- Heterogens: CA, DGT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2jegA (A:)
hhhhhhmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfg
vkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdk
vrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrl
ireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeyn
epirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedld
ivsrgrtfphgisketaysesvkllqkileederkirrigvrfskfieaigldkffdt
Sequence, based on observed residues (ATOM records): (download)
>2jegA (A:)
hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagi
piveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyr
eaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireld
iadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirt
rvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrg
rtfphgisketaysesvkllqkileederkirrigvrfskfie
- Chain 'P':
No sequence available.
- Chain 'T':
No sequence available.