SCOPe 2.05: Structural Classification of Proteins

PDB entry 2jd8

View 2jd8 on RCSB PDB site
Description: crystal structure of the zn-soaked ferritin from the hyperthermophilic archaeal anaerobe pyrococcus furiosus
Class: metal transport
Keywords: metal transport, ferritin, iron, archaeon, hyperthermophile, ferroxidase center, thermostability, entry channels, pores metal transport
Deposited on 2007-01-05, released 2007-02-27
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.203
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

Chain '0':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd80_
Chain '1':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd81_
Chain '2':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd82_
Chain '3':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd83_
Chain '4':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd84_
Chain '5':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd85_
Chain '6':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd86_
Chain '7':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd87_
Chain '8':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd88_
Chain '9':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd89_
Chain 'A':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8a_
Chain 'B':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8b_
Chain 'C':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8c_
Chain 'D':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8d_
Chain 'E':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8e_
Chain 'F':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8f_
Chain 'G':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8g_
Chain 'H':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8h_
Chain 'I':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8i_
Chain 'J':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8j_
Chain 'K':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8k_
Chain 'L':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8l_
Chain 'M':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8m_
Chain 'N':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8n_
Chain 'O':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8o_
Chain 'P':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8p_
Chain 'Q':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8q_
Chain 'R':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8r_
Chain 'S':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8s_
Chain 'T':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8t_
Chain 'U':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8u_
Chain 'V':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8v_
Chain 'W':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8w_
Chain 'X':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8x_
Chain 'Y':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8y_
Chain 'Z':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.05: d2jd8z_
Heterogens: ZN, FE, SO4, HOH

PDB Chain Sequences:

Chain '0':
Sequence, based on SEQRES records: (download)

>2jd80 (0:)
mlsermlkalndqlnrelysaylyfamaayfedlglegfanwmkaqaeeeighalrfyny
iydrngrveldeipkppkewesplkafeaayehekfisksiyelaalaeeekdystrafl
ewfineqveeeasvkkildklkfakdspqilfmldkelsarapklpgllmqgge