SCOPe 2.04: Structural Classification of Proteins

PDB entry 2jd7

View 2jd7 on RCSB PDB site
Description: crystal structure of the fe-soaked ferritin from the hyperthermophilic archaeal anaerobe pyrococcus furiosus
Class: metal transport
Keywords: metal transport, iron, pores, ferritin, archaeon, entry channels, thermostability, hyperthermophile, ferroxidase center metal transport
Deposited on 2007-01-05, released 2007-02-27
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.201
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

Chain '0':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd70_
Chain '1':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd71_
Chain '2':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd72_
Chain '3':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd73_
Chain '4':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd74_
Chain '5':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd75_
Chain '6':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd76_
Chain '7':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd77_
Chain '8':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd78_
Chain '9':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd79_
Chain 'A':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7a_
Chain 'B':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7b_
Chain 'C':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7c_
Chain 'D':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7d_
Chain 'E':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7e_
Chain 'F':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7f_
Chain 'G':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7g_
Chain 'H':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7h_
Chain 'I':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7i_
Chain 'J':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7j_
Chain 'K':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7k_
Chain 'L':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7l_
Chain 'M':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7m_
Chain 'N':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7n_
Chain 'O':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7o_
Chain 'P':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7p_
Chain 'Q':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7q_
Chain 'R':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7r_
Chain 'S':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7s_
Chain 'T':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7t_
Chain 'U':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7u_
Chain 'V':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7v_
Chain 'W':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7w_
Chain 'X':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7x_
Chain 'Y':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7y_
Chain 'Z':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.04: d2jd7z_
Heterogens: FE, SO4, HOH

PDB Chain Sequences:

Chain '0':
Sequence, based on SEQRES records: (download)

>2jd70 (0:)
mlsermlkalndqlnrelysaylyfamaayfedlglegfanwmkaqaeeeighalrfyny
iydrngrveldeipkppkewesplkafeaayehekfisksiyelaalaeeekdystrafl
ewfineqveeeasvkkildklkfakdspqilfmldkelsarapklpgllmqgge