SCOPe 2.08: Structural Classification of Proteins

PDB entry 2jd6

View 2jd6 on RCSB PDB site
Description: crystal structure of the as isolated ferritin from the hyperthermophilic archaeal anaerobe pyrococcus furiosus
Class: metal transport
Keywords: metal transport, iron, pores, ferritin, archaeon, entry channels, thermostability, hyperthermophile, ferroxidase center
Deposited on 2007-01-05, released 2007-02-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: 0.198
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

Chain '0':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd60_
Chain '1':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd61_
Chain '2':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd62_
Chain '3':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd63_
Chain '4':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd64_
Chain '5':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd65_
Chain '6':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd66_
Chain '7':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd67_
Chain '8':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd68_
Chain '9':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd69_
Chain 'A':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6a_
Chain 'B':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6b_
Chain 'C':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6c_
Chain 'D':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6d_
Chain 'E':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6e_
Chain 'F':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6f_
Chain 'G':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6g_
Chain 'H':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6h_
Chain 'I':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6i_
Chain 'J':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6j_
Chain 'K':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6k_
Chain 'L':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6l_
Chain 'M':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6m_
Chain 'N':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6n_
Chain 'O':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6o_
Chain 'P':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6p_
Chain 'Q':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6q_
Chain 'R':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6r_
Chain 'S':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6s_
Chain 'T':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6t_
Chain 'U':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6u_
Chain 'V':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6v_
Chain 'W':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6w_
Chain 'X':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6x_
Chain 'Y':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6y_
Chain 'Z':
Compound: ferritin homolog
Species: Pyrococcus furiosus [TaxId:2261]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8U2T8 (0-End)
Domains in SCOPe 2.08: d2jd6z_
Heterogens: FE, SO4, HOH

PDB Chain Sequences:

Chain '0':
Sequence, based on SEQRES records: (download)

>2jd60 (0:)
mlsermlkalndqlnrelysaylyfamaayfedlglegfanwmkaqaeeeighalrfyny
iydrngrveldeipkppkewesplkafeaayehekfisksiyelaalaeeekdystrafl
ewfineqveeeasvkkildklkfakdspqilfmldkelsarapklpgllmqgge