PDB entry 2jbl
View 2jbl on RCSB PDB site
Description: photosynthetic reaction center from blastochloris viridis
Class: electron transport
Keywords: chromophore, formylation, chlorophyll, lipoprotein, stigmatellin, metal-binding, transmembrane, iron, heme, membrane, transport, magnesium, photosynthesis, reaction center, electron transport, bacteriochlorophyll, photosynthetic reaction center
Deposited on
2006-12-08, released
2007-03-13
The last revision prior to the SCOPe 2.03 freeze date was dated
2012-02-01, with a file datestamp of
2012-01-27.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.19
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'C':
Compound: Photosynthetic reaction center cytochrome c subunit
Species: BLASTOCHLORIS VIRIDIS [TaxId:1079]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2jblc_ - Chain 'H':
Compound: reaction center protein h chain
Species: BLASTOCHLORIS VIRIDIS [TaxId:1079]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2jblh1, d2jblh2 - Chain 'L':
Compound: reaction center protein l chain
Species: BLASTOCHLORIS VIRIDIS [TaxId:1079]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2jbll_ - Chain 'M':
Compound: reaction center protein m chain
Species: BLASTOCHLORIS VIRIDIS [TaxId:1079]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2jblm_ - Heterogens: HEM, LDA, SO4, BCB, BPB, SMA, FE, MQ7, NS5, HOH
PDB Chain Sequences:
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2jblC (C:)
mkqlivnsvatvalaslvagcfepppatttqtgfrglsmgevlhpatvkakkerdaqypp
alaavkaegppvsqvyknvkvlgnlteaeflrtmtaitewvspqegctychdennlasea
kypyvvarrmlemtraintnwtqhvaqtgvtcytchrgtplppyvryleptlplnnretp
thvervetrsgyvvrlakytaysalnydpftmflandkrqvrvvpqtalplvgvsrgker
rplsdayatfalmmsisdslgtnctfchnaqtfeswgkkstpqraiawwgirmvrdlnmn
ylaplnaslpasrlgrqgeapqadcrtchqgvtkplfgasrlkdypelgpikaaak
Sequence, based on observed residues (ATOM records): (download)
>2jblC (C:)
cfepppatttqtgfrglsmgevlhpatvkakkerdaqyppalaavkaegppvsqvyknvk
vlgnlteaeflrtmtaitewvspqegctychdennlaseakypyvvarrmlemtraintn
wtqhvaqtgvtcytchrgtplppyvryleptlplnnretpthvervetrsgyvvrlakyt
aysalnydpftmflandkrqvrvvpqtalplvgvsrgkerrplsdayatfalmmsisdsl
gtnctfchnaqtfeswgkkstpqraiawwgirmvrdlnmnylaplnaslpasrlgrqgea
pqadcrtchqgvtkplfgasrlkdypelgpik
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>2jblH (H:)
myhgalaqhldiaqlvwyaqwlviwtvvllylrredrregyplveplglvklapedgqvy
elpypktfvlphggtvtvprrrpetrelklaqtdgfegaplqptgnplvdavgpasyaer
aevvdatvdgkakivplrvatdfsiaegdvdprglpvvaadgveagtvtdlwvdrsehyf
rylelsvagsartaliplgfcdvkkdkivvtsilseqfanvprlqsrdqitlreedkvsa
yyaggllyatperaesll
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>2jblL (L:)
allsferkyrvrggtliggdlfdfwvgpyfvgffgvsaiffiflgvsligyaasqgptwd
pfaisinppdlkyglgaaplleggfwqaitvcalgafiswmlreveisrklgigwhvpla
fcvpifmfcvlqvfrplllgswghafpygilshldwvnnfgyqylnwhynpghmssvsfl
fvnamalglhgglilsvanpgdgdkvktaehenqyfrdvvgysigalsihrlglflasni
fltgafgtiasgpfwtrgwpewwgwwldipfws
- Chain 'M':
Sequence; same for both SEQRES and ATOM records: (download)
>2jblM (M:)
adyqtiytqiqargphitvsgewgdndrvgkpfysywlgkigdaqigpiylgasgiaafa
fgstailiilfnmaaevhfdplqffrqffwlglyppkaqygmgipplhdggwwlmaglfm
tlslgswwirvysraralglgthiawnfaaaiffvlcigcihptlvgswsegvpfgiwph
idwltafsirygnfyycpwhgfsigfaygcgllfaahgatilavarfggdreieqitdrg
taveraalfwrwtigfnatiesvhrwgwffslmvmvsasvgilltgtfvdnwylwcvkhg
aapdypaylpatpdpaslpgapk