PDB entry 2j47

View 2j47 on RCSB PDB site
Description: bacteroides thetaiotaomicron gh84 o-glcnacase in complex with a imidazole-pugnac hybrid inhibitor
Class: inhibitor
Keywords: o-glcnacase, imidazole, gh84, pugnac, enzyme, inhibition, inhibitor
Deposited on 2006-08-25, released 2006-10-03
The last revision prior to the SCOP 1.73 freeze date was dated 2006-10-25, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 1.98 Å
R-factor: 0.193
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glucosaminidase
    Species: BACTEROIDES THETAIOTAOMICRON
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2j47a1, d2j47a2, d2j47a3
  • Heterogens: GDV, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2j47A (A:)
qnvslqpppqqlivqnktidlpavyqlnggeeanphavkvlkellsgkqsskkgmlisig
ekgdksvrkysrqipdhkegyylsvnekeivlagndergtyyalqtfaqllkdgklpeve
ikdypsvryrgvvegfygtpwshqarlsqlkfygknkmntyiygpkddpyhsapnwrlpy
pdkeaaqlqelvavanenevdfvwaihpgqdikwnkedrdlllakfekmyqlgvrsfavf
fddisgegtnpqkqaellnyidekfaqvkpdinqlvmcpteynkswsnpngnylttlgdk
lnpsiqimwtgdrvisditrdgiswinerikrpayiwwnfpvsdyvrdhlllgpvygndt
tiakemsgfvtnpmehaesskiaiysvasyawnpakydtwqtwkdairtilpsaaeelec
famhnsdlgpnghgyrreesmdiqpaaerflkafkegknydkadfetlqytfermkesad
illmntenkpliveitpwvhqfkltaemgeevlkmvegrnesyflrkynhvkalqqqmfy
idqtsnqnpyqpgvktatrvikplidrtfatvvkffnqkfnahldattdymphkmisnve
qiknlplqvkanrvlispanevvkwaagnsveieldaiypgeniqinfgkdapctwgrle
istdgkewktvdlkqkesrlsaglqkapvkfvrftnvsdeeqqvylrqfvltiekk

    Sequence, based on observed residues (ATOM records): (download) 
    >2j47A (A:)
slqpppqqlivqnktidyqlnggeeanphavkvlkellsggmlisigekgdksvrkysrq
ipdhkegyylsvnekeivlagndergtyyalqtfaqllkdgklpeveikdypsvryrgvv
egfygtpwshqarlsqlkfygknkmntyiygpkddpyhsapnwrlpypdkeaaqlqelva
vanenevdfvwaihpgqdikwnkedrdlllakfekmyqlgvrsfavffddisgegtnpqk
qaellnyidekfaqvkpdinqlvmcpteynkswsnpngnylttlgdklnpsiqimwtgdr
visditrdgiswinerikrpayiwwnfpvsdyvrdhlllgpvygndttiakemsgfvtnp
mehaesskiaiysvasyawnpakydtwqtwkdairtilpsaaeelecfamhnsdlgpngh
gyrreesmdiqpaaerflkafkydkadfetlqytfermkesadillmntenkpliveitp
wvhqfkltaemgeevlkmvegrnesyflrkynhvkalqqqmfyidqtsnqnpyqpgvkta
trvikplidrtfatvvkffnqkfnahldattd