PDB entry 2j1v
View 2j1v on RCSB PDB site
Description: structure of a streptococcus pneumoniae fucose binding module in complex with the blood group h-trisaccharide
Class: carbohydrate-binding protein
Keywords: carbohydrate-binding protein, carbohydrate binding protein
Deposited on
2006-08-15, released
2006-09-06
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.45 Å
R-factor: 0.154
AEROSPACI score: 0.67
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: fucolectin-related protein
Species: STREPTOCOCCUS PNEUMONIAE [TaxId:170187]
Database cross-references and differences (RAF-indexed):
- PDB 2J1V
- Uniprot Q97N96 (Start-150)
Domains in SCOPe 2.06: d2j1va_ - Chain 'B':
Compound: fucolectin-related protein
Species: STREPTOCOCCUS PNEUMONIAE [TaxId:170187]
Database cross-references and differences (RAF-indexed):
- PDB 2J1V
- Uniprot Q97N96 (Start-150)
Domains in SCOPe 2.06: d2j1vb_ - Heterogens: CA, NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2j1vA (A:)
gshmastpdkfndgnlniayakpttqssvdyngdpnravdgnrngnfnsgsvthtradnp
swwevdlkkmdkvglvkiynrtdaetqrlsnfdvilydnnrnevakkhvnnlsgesvsld
fkekgaryikvklltsgvplslaevevfres
Sequence, based on observed residues (ATOM records): (download)
>2j1vA (A:)
kfndgnlniayakpttqssvdyngdpnravdgnrngnfnsgsvthtradnpswwevdlkk
mdkvglvkiynrtdaetqrlsnfdvilydnnrnevakkhvnnlsgesvsldfkekgaryi
kvklltsgvplslaevevfres
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2j1vB (B:)
gshmastpdkfndgnlniayakpttqssvdyngdpnravdgnrngnfnsgsvthtradnp
swwevdlkkmdkvglvkiynrtdaetqrlsnfdvilydnnrnevakkhvnnlsgesvsld
fkekgaryikvklltsgvplslaevevfres
Sequence, based on observed residues (ATOM records): (download)
>2j1vB (B:)
nlniayakpttqssvdyngdpnravdgnrngnfnsgsvthtradnpswwevdlkkmdkvg
lvkiynrtdaetqrlsnfdvilydnnrnevakkhvnnlsgesvsldfkekgaryikvkll
tsgvplslaevevfres