PDB entry 2ihm
View 2ihm on RCSB PDB site
Description: Polymerase mu in ternary complex with gapped 11mer DNA duplex and bound incoming nucleotide
Class: Transferase/DNA
Keywords: polymerase, helix-turn-helix, Transferase/DNA COMPLEX
Deposited on
2006-09-26, released
2006-12-12
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.23
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase mu
Species: Mus musculus [TaxId:10090]
Gene: Polm
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2ihma1, d2ihma2, d2ihma3 - Chain 'B':
Compound: DNA polymerase mu
Species: Mus musculus [TaxId:10090]
Gene: Polm
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2ihmb1, d2ihmb2, d2ihmb3 - Chain 'D':
Compound: 5'-d(p*gp*cp*cp*g)-3'
- Chain 'E':
Compound: 5'-d(p*gp*cp*cp*g)-3'
- Chain 'P':
Compound: 5'-d(*cp*ap*gp*tp*ap*t)-3'
- Chain 'Q':
Compound: 5'-d(*cp*ap*gp*tp*ap*t)-3'
- Chain 'T':
Compound: 5'-d(*cp*gp*gp*cp*ap*ap*tp*ap*cp*tp*g)-3'
- Chain 'U':
Compound: 5'-d(*cp*gp*gp*cp*ap*ap*tp*ap*cp*tp*g)-3'
- Heterogens: MG, NA, D3T, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2ihmA (A:)
smpayacqrpsplthhntllsealetlaeaagfeanegrllsfsraasvlkslpcpvasl
sqlhglpyfgehstrviqellehgtceevkqvrcseryqtmklftqvfgvgvktanrwyq
eglrtldelreqpqrltqqqkaglqyyqdlstpvrradaealqqlieaavrqtlpgatvt
ltggfrrgklqghdvdflithpeegqevgllpkvmsclqsqglvlyhqyhrshladsahn
lrqrsstmdvfersfcilglpqpqqaalagalppcptwkavrvdlvvtpssqfpfallgw
tgsqfferelrrfsrqekglwlnshglfdpeqkrvfhatseedvfrllglkylppeqrna
Sequence, based on observed residues (ATOM records): (download)
>2ihmA (A:)
smpayacqrpsplthhntllsealetlaeaagfeanegrllsfsraasvlkslpcpvasl
sqlhglpyfgehstrviqellehgtceevkqvrcseryqtmklftqvfgvgvktanrwyq
eglrtldelreqpqrltqqqkaglqyyqdlstpvrradaealqqlieaavrqtlpgatvt
ltggfrrgklqghdvdflithpeegqevgllpkvmsclqsqglvlyhqyhrshdvfersf
cilglpqptwkavrvdlvvtpssqfpfallgwtgsqfferelrrfsrqekglwlnshglf
dpeqkrvfhatseedvfrllglkylppeqrna
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2ihmB (B:)
smpayacqrpsplthhntllsealetlaeaagfeanegrllsfsraasvlkslpcpvasl
sqlhglpyfgehstrviqellehgtceevkqvrcseryqtmklftqvfgvgvktanrwyq
eglrtldelreqpqrltqqqkaglqyyqdlstpvrradaealqqlieaavrqtlpgatvt
ltggfrrgklqghdvdflithpeegqevgllpkvmsclqsqglvlyhqyhrshladsahn
lrqrsstmdvfersfcilglpqpqqaalagalppcptwkavrvdlvvtpssqfpfallgw
tgsqfferelrrfsrqekglwlnshglfdpeqkrvfhatseedvfrllglkylppeqrna
Sequence, based on observed residues (ATOM records): (download)
>2ihmB (B:)
smpayacqrpsplthhntllsealetlaeaagfeanegrllsfsraasvlkslpcpvasl
sqlhglpyfgehstrviqellehgtceevkqvrcseryqtmklftqvfgvgvktanrwyq
eglrtldelreqpqrltqqqkaglqyyqdlstpvrradaealqqlieaavrqtlpgatvt
ltggfrrgklqghdvdflithpeegqevgllpkvmsclqsqglvlyhqyfersfcilglp
qpqqagalppcptwkavrvdlvvtpssqfpfallgwtgsqfferelrrfsrqekglwlns
hglfdpeqkrvfhatseedvfrllglkylppeqrna
- Chain 'D':
No sequence available.
- Chain 'E':
No sequence available.
- Chain 'P':
No sequence available.
- Chain 'Q':
No sequence available.
- Chain 'T':
No sequence available.
- Chain 'U':
No sequence available.