PDB entry 2ibi

View 2ibi on RCSB PDB site
Description: Covalent Ubiquitin-USP2 Complex
Class: hydrolase
Keywords: Hydrolase, Protease, Thiol protease, Ubl conjugation pathway, Structural Genomics, Structural Genomics Consortium, SGC
Deposited on 2006-09-11, released 2006-10-24
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.194
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin carboxyl-terminal hydrolase 2
    Species: Homo sapiens [TaxId:9606]
    Gene: USP2, UBP41
    Database cross-references and differences (RAF-indexed):
    • Uniprot O75604
      • engineered (240-241)
    Domains in SCOPe 2.06: d2ibia1
  • Chain 'B':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Gene: RPS27A, UBA52, UBB, UBC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2ibib_
  • Heterogens: ZN, NEH, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2ibiA (A:)
    mgsshhhhhhssglvprgssspgrdgmnsksaqglaglrnlgntcfmnsilqclsntrel
    rdyclqrlymrdlhhgsnahtalveefakliqtiwtsspndvvspsefktqiqryaprfv
    gynqqdaqeflrflldglhnevnrvtlrpksnpenldhlpddekgrqmwrkyleredsri
    gdlfvgqlkssltctdcgycstvfdpfwdlslpiakrgypevtlmdcmrlftkedvldgd
    aaptccrcrgrkrcikkfsiqrfpkilvlhlkrfsesrirtsklttfvnfplrdldlref
    asentnhavynlyavsnhsgttmgghytaycrspgtgewhtfndssvtpmsssqvrtsda
    yllfyelasppsrm
    

    Sequence, based on observed residues (ATOM records): (download)
    >2ibiA (A:)
    aqglaglrnlgntcfmnsilqclsntrelrdyclqrlymrdlhhgsnahtalveefakli
    qtiwtsspndvvspsefktqiqryaprfvgynqqdaqeflrflldglhnevnrvtlrpkn
    penldhlpddekgrqmwrkyleredsrigdlfvgqlkssltctdcgycstvfdpfwdlsl
    piakrgpevtlmdcmrlftkedvldgdaaptccrcrgrkrcikkfsiqrfpkilvlhlkr
    fsesrirtsklttfvnfplrdldlrefasenthavynlyavsnhsgttmgghytaycrsp
    gtgewhtfndssvtpmsssqvrtsdayllfyelas
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2ibiB (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrg