PDB entry 2i9l
View 2i9l on RCSB PDB site
Description: Structure of Fab 7D11 from a neutralizing antibody against the poxvirus L1 protein
Class: immune system/viral protein
Keywords: Neutralizing antibody, Poxvirus, antibody complex, IMMUNE SYSTEM-VIRAL PROTEIN COMPLEX
Deposited on
2006-09-05, released
2007-09-18
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-25.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.24
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Antibody 7D11 light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2i9la1, d2i9la2 - Chain 'B':
Compound: Antibody 7D11 heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Antibody 7D11 light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2i9lc1, d2i9lc2 - Chain 'D':
Compound: Antibody 7D11 heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: Antibody 7D11 light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2i9le1, d2i9le2 - Chain 'F':
Compound: Antibody 7D11 heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: Antibody 7D11 light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2i9lg1, d2i9lg2 - Chain 'H':
Compound: Antibody 7D11 heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: Virion membrane protein M25
Species: Vaccinia virus [TaxId:10245]
Gene: l1r
Database cross-references and differences (RAF-indexed):
- Chain 'J':
Compound: Virion membrane protein M25
Species: Vaccinia virus [TaxId:10245]
Gene: l1r
Database cross-references and differences (RAF-indexed):
- Chain 'K':
Compound: Virion membrane protein M25
Species: Vaccinia virus [TaxId:10245]
Gene: l1r
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: Virion membrane protein M25
Species: Vaccinia virus [TaxId:10245]
Gene: l1r
Database cross-references and differences (RAF-indexed):
- Heterogens: GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2i9lA (A:)
dmvmsqspsslavsagekvsmsckssqtllnsrtrknylawyqqkpgqspklliywastr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsynlwtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgseraagvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrnec
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>2i9lC (C:)
dmvmsqspsslavsagekvsmsckssqtllnsrtrknylawyqqkpgqspklliywastr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsynlwtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgseraagvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrnec
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>2i9lE (E:)
dmvmsqspsslavsagekvsmsckssqtllnsrtrknylawyqqkpgqspklliywastr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsynlwtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgseraagvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrnec
- Chain 'F':
No sequence available.
- Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)
>2i9lG (G:)
dmvmsqspsslavsagekvsmsckssqtllnsrtrknylawyqqkpgqspklliywastr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsynlwtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgseraagvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrnec
- Chain 'H':
No sequence available.
- Chain 'I':
No sequence available.
- Chain 'J':
No sequence available.
- Chain 'K':
No sequence available.
- Chain 'L':
No sequence available.