PDB entry 2hmi
View 2hmi on RCSB PDB site
Description: hiv-1 reverse transcriptase/fragment of fab 28/DNA complex
Class: immune system/DNA
Keywords: aids, hiv-1, rt, polymerase
Deposited on
1998-04-10, released
1998-10-14
The last revision prior to the SCOP 1.73 freeze date was dated
2003-04-01, with a file datestamp of
2007-06-28.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.271
AEROSPACI score: 0.16
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: subunit of v-1 reverse transcriptase
Species: Human immunodeficiency virus 1
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d2hmia1, d2hmia2 - Chain 'B':
Compound: hisubunit of v-1 reverse transcriptase
Species: Human immunodeficiency virus 1
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d2hmib_ - Chain 'C':
Compound: fab fragment of monoclonal antibody 28
Species: Mus musculus
Domains in SCOP 1.73: d2hmic1, d2hmic2 - Chain 'D':
Compound: fab fragment of monoclonal antibody 28
Species: Mus musculus
Domains in SCOP 1.73: d2hmid1, d2hmid2 - Chain 'E':
Compound: DNA (5'-d(*ap*tp*gp*gp*cp*gp*cp*cp*cp*gp*ap*ap*cp*ap*gp*gp*gp*ap*c)-3')
- Chain 'F':
Compound: DNA (5'-d(*gp*tp*cp*cp*cp*tp*gp*tp*tp*cp*gp*gp*gp*cp*gp*cp*cp*a)-3')
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2hmiA (A:)
pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpv
faikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpl
dedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdivi
yqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwt
vqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeae
lelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrga
htndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntp
plvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelq
aiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahk
giggneqvdklvsagirk
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2hmiB (B:)
pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpv
faikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpl
dedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdivi
yqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwt
vqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeae
lelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrga
htndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntp
plvklwyqle
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>2hmiC (C:)
diqmtqttsslsaslgdrvtiscsasqdissylnwyqqkpegtvklliyytsslhsgvps
afsgsgsgtdysltisnlepedfatyycqqyskfpwtfgggtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvawaidgsaaangvlnswtdqdskdstysmsstlt
ltadeyeaansytcaathktstspivksfnanec
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>2hmiD (D:)
qitlkesgpgivqpsqpfrltctfsgfslstsgigvtwirqpsgkglewlatiwwdddnr
ynpslksrltvskdtsnnqaflnmmtvetadtaiyycaqsaitsvtdsamdhwgqgtsvt
vssaattppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavl
qsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkki
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.