PDB entry 2gsg

View 2gsg on RCSB PDB site
Description: Crystal structure of the Fv fragment of a monoclonal antibody specific for poly-glutamine
Class: immune system
Keywords: Fv, monoclonal antibody, poly-glutamine, IMMUNE SYSTEM
Deposited on 2006-04-26, released 2007-04-24
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.229
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: monoclonal antibody light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2GSG (0-End)
    Domains in SCOPe 2.06: d2gsga_
  • Chain 'B':
    Compound: monoclonal antibody heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2GSG (0-117)
    Domains in SCOPe 2.06: d2gsgb_
  • Chain 'C':
    Compound: monoclonal antibody light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2GSG (0-End)
    Domains in SCOPe 2.06: d2gsgc_
  • Chain 'D':
    Compound: monoclonal antibody heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2GSG (0-117)
    Domains in SCOPe 2.06: d2gsgd_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2gsgA (A:)
qlvltqsssasfslgasakltctlssqhstytiewyqqqplkppkyvmelkkdgshstgd
gipdrfsgsssgadrylsisniqpedeaiyicgvgdtikeqfvyvfgggtkvtvlg

    Sequence, based on observed residues (ATOM records): (download) 
    >2gsgA (A:)
qlvltqsssasfslgasakltctlssqhstytiewyqqqplkppkyvmelkkdgshstgd
gipdrfsgsssgadrylsisniqpedeaiyicgvgdtikeqfvyvfgggtkvtv

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2gsgB (B:)
qvqlqesggglvqpggslklscaasgftfrdyymywvrqtpekrlewvafisngggstyy
pdtvkgrftisrdnakntlylqmsrlksedtamyycargrgyvwfaywgqgttvtvss

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2gsgC (C:)
qlvltqsssasfslgasakltctlssqhstytiewyqqqplkppkyvmelkkdgshstgd
gipdrfsgsssgadrylsisniqpedeaiyicgvgdtikeqfvyvfgggtkvtvlg

    Sequence, based on observed residues (ATOM records): (download) 
    >2gsgC (C:)
qlvltqsssasfslgasakltctlssqhstytiewyqqqplkppkyvmelkkdgshstgd
gipdrfsgsssgadrylsisniqpedeaiyicgvgdtikeqfvyvfgggtkvtv

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2gsgD (D:)
qvqlqesggglvqpggslklscaasgftfrdyymywvrqtpekrlewvafisngggstyy
pdtvkgrftisrdnakntlylqmsrlksedtamyycargrgyvwfaywgqgttvtvss