PDB entry 2gol

View 2gol on RCSB PDB site
Description: Xray Structure of Gag278
Class: viral protein
Keywords: Viral Maturation, Immature, Gag, HIV-1, VIRAL PROTEIN
Deposited on 2006-04-13, released 2006-09-26
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.205
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Matrix protein p17 (MA)
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2gola_
  • Chain 'B':
    Compound: Capsid protein p24 (CA)
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2golb_
  • Chain 'D':
    Compound: Capsid protein p24 (CA)
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2gold_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2golA (A:)
hmgarasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrq
ilgqlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqnkskkkaqqaa
adtgnnsqvsqny

    Sequence, based on observed residues (ATOM records): (download) 
    >2golA (A:)
svlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrqilgqlq
pslqtgseelrslyntiavlycvhqridvkdtkealdkieee

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2golB (B:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys

    Sequence, based on observed residues (ATOM records): (download) 
    >2golB (B:)
hqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqmlke
tineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmthnppipvgeiyk
rwiilglnkivrmys

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2golD (D:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys

    Sequence, based on observed residues (ATOM records): (download) 
    >2golD (D:)
hqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqmlke
tineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmthnppipvgeiyk
rwiilglnkivrmys