PDB entry 2gmi

View 2gmi on RCSB PDB site
Description: Mms2/Ubc13~Ubiquitin
Class: ligase, human protein
Keywords: ubiquitin, Ubc13, Mms2, E2, UEV, Ubc13 ubiquitin covalent complex,
Deposited on 2006-04-06, released 2006-09-19
The last revision prior to the SCOP 1.73 freeze date was dated 2006-10-31, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.237
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin-conjugating enzyme E2 13
    Species: Saccharomyces cerevisiae
    Gene: UBC13
    Database cross-references and differences (RAF-indexed):
    • Uniprot P52490 (0-151)
      • engineered (86)
  • Chain 'B':
    Compound: Ubiquitin-conjugating enzyme variant MMS2
    Species: Saccharomyces cerevisiae
    Gene: MMS2
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2gmib1
  • Chain 'C':
    Compound: Ubiquitin
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2gmic1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2gmiB (B:)
    mskvprnfrlleelekgekgfgpescsygladsdditmtkwngtilgpphsnhenriysl
    sidcgpnypdsppkvtfiskinlpcvnpttgevqtdfhtlrdwkraytmetllldlrkem
    atpankklrqpkegetf
    

    Sequence, based on observed residues (ATOM records): (download)
    >2gmiB (B:)
    kvprnfrlleelekgekgfgpescsygladsdditmtkwngtilgpphsnhenriyslsi
    dcgpnypdsppkvtfiskinlpcvnpttgevqtdfhtlrdwkraytmetllldlrkemat
    pankklrqpkegetf
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2gmiC (C:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg