PDB entry 2gdv

View 2gdv on RCSB PDB site
Description: Sucrose phosphorylase from BIFIDOBACTERIUM ADOLESCENTIS reacted with sucrose
Class: transferase
Keywords: beta-alpha-barrels, dimer, glycoside hydrolase
Deposited on 2006-03-17, released 2006-09-26
The last revision prior to the SCOP 1.73 freeze date was dated 2006-09-26, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.198
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: sucrose phosphorylase
    Species: Bifidobacterium adolescentis
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2gdva1, d2gdva2
  • Chain 'B':
    Compound: sucrose phosphorylase
    Species: Bifidobacterium adolescentis
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2gdvb1, d2gdvb2
  • Heterogens: GLC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2gdvA (A:)
mknkvqlityadrlgdgtiksmtdilrtrfdgvydgvhilpfftpfdgadagfdpidhtk
vderlgswddvaelskthnimvdaivnhmsweskqfqdvlakgeeseyypmfltmssvfp
ngateedlagiyrprpglpfthykfagktrlvwvsftpqqvdidtdsdkgweylmsifdq
maashvsyirldavgygakeagtscfmtpktfklisrlreegvkrgleilievhsyykkq
veiaskvdrvydfalpplllhalstghvepvahwtdirpnnavtvldthdgigvidigsd
qldrslkglvpdedvdnlvntihanthgesqaatgaaasnldlyqvnstyysalgcndqh
yiaaravqfflpgvpqvyyvgalagkndmellrktnngrdinrhyystaeidenlkrpvv
kalnalakfrneldafdgtfsyttdddtsisftwrgetsqatltfepkrglgvdnttpva
mlewedsagdhrsddlianppvva

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2gdvB (B:)
mknkvqlityadrlgdgtiksmtdilrtrfdgvydgvhilpfftpfdgadagfdpidhtk
vderlgswddvaelskthnimvdaivnhmsweskqfqdvlakgeeseyypmfltmssvfp
ngateedlagiyrprpglpfthykfagktrlvwvsftpqqvdidtdsdkgweylmsifdq
maashvsyirldavgygakeagtscfmtpktfklisrlreegvkrgleilievhsyykkq
veiaskvdrvydfalpplllhalstghvepvahwtdirpnnavtvldthdgigvidigsd
qldrslkglvpdedvdnlvntihanthgesqaatgaaasnldlyqvnstyysalgcndqh
yiaaravqfflpgvpqvyyvgalagkndmellrktnngrdinrhyystaeidenlkrpvv
kalnalakfrneldafdgtfsyttdddtsisftwrgetsqatltfepkrglgvdnttpva
mlewedsagdhrsddlianppvva