PDB entry 2fwo

View 2fwo on RCSB PDB site
Description: MHC Class I H-2Kd heavy chain in complex with beta-2microglobulin and peptide derived from influenza nucleoprotein
Class: immune system/viral protein
Keywords: MHC, Antigens/Peptides/Epitopes, Antigen Processing/Presentation, IMMUNE SYSTEM/VIRAL PROTEIN COMPLEX
Deposited on 2006-02-02, released 2006-02-21
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.218
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: H-2 class I histocompatibility antigen, K-D alpha chain
    Species: Mus musculus [TaxId:10090]
    Gene: H2-K1, H2-K
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2fwoa1, d2fwoa2
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Mus musculus [TaxId:10090]
    Gene: B2M
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2fwob_
  • Chain 'P':
    Compound: TYQRTRALV peptide from Nucleoprotein
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2fwoA (A:)
    gphslryfvtavsrpglgeprfiavgyvddtqfvrfdsdadnprfeprapwmeqegpeyw
    eeqtqraksdeqwfrvslrtaqryynqskggshtfqrmfgcdvgsdwrllrgyqqfaydg
    rdyialnedlktwtaadtaalitrrkweqagdaeyyraylegecvewlrrylelgnetll
    rtdspkahvtyhprsqvdvtlrcwalgfypaditltwqlngedltqdmelvetrpagdgt
    fqkwaavvvplgkeqnytchvhhkglpepltlrwklppstvsn
    

    Sequence, based on observed residues (ATOM records): (download)
    >2fwoA (A:)
    gphslryfvtavsrpglgeprfiavgyvddtqfvrfdsdadnprfeprapwmeqegpeyw
    eeqtqraksdeqwfrvslrtaqryynqskggshtfqrmfgcdvgsdwrllrgyqqfaydg
    rdyialnedlktwtaadtaalitrrkweqagdaeyyraylegecvewlrrylelgnetll
    rtdspkahvtyhprsqvdvtlrcwalgfypaditltwqlngedltqdmelvetrpagdgt
    fqkwaavvvplgkeqnytchvhhkglpepltlrwk
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2fwoB (B:)
    miqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskd
    wsfyilahteftptetdtyacrvkhdsmaepktvywdrdm
    

    Sequence, based on observed residues (ATOM records): (download)
    >2fwoB (B:)
    iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
    sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
    

  • Chain 'P':
    No sequence available.