PDB entry 2fjh
View 2fjh on RCSB PDB site
Description: Structure of the B20-4 Fab, a phage derived Fab fragment, in complex with VEGF
Class: hormone/growth factor/immune system
Keywords: VEGF, Fab, Protein Fab complex, Cystine knot, HORMONE-GROWTH FACTOR-IMMUNE SYSTEM COMPLEX
Deposited on
2006-01-02, released
2006-02-07
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.2
AEROSPACI score: 0.2
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Fab fragment light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2fjha1, d2fjha2 - Chain 'B':
Compound: Fab fragment heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: Fab fragment heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: Fab fragment light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2fjhl1, d2fjhl2 - Chain 'V':
Compound: Vascular Endothelial Growth Factor A
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2fjhv_ - Chain 'W':
Compound: Vascular Endothelial Growth Factor A
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2fjhw_
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2fjhA (A:)
diqmtqspsslsasvgdrvtitcrasqvirrslawyqqkpgkapklliyaasnlasgvps
rfsgsgsgtdftltisslqpedfatyycqqsntspltfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>2fjhA (A:)
diqmtqspsslsasvgdrvtitcrasqvirrslawyqqkpgkapklliyaasnlasgvps
rfsgsgsgtdftltisslqpedfatyycqqsntspltfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnr
- Chain 'B':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>2fjhL (L:)
diqmtqspsslsasvgdrvtitcrasqvirrslawyqqkpgkapklliyaasnlasgvps
rfsgsgsgtdftltisslqpedfatyycqqsntspltfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec
- Chain 'V':
Sequence, based on SEQRES records: (download)
>2fjhV (V:)
gqnhhevvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndegle
cvpteesnitmqimrikphqgqhigemsflqhnkcecrpkkd
Sequence, based on observed residues (ATOM records): (download)
>2fjhV (V:)
hevvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndeglecvpt
eesnitmqimrikphqgqhigemsflqhnkcecrpkkd
- Chain 'W':
Sequence, based on SEQRES records: (download)
>2fjhW (W:)
gqnhhevvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndegle
cvpteesnitmqimrikphqgqhigemsflqhnkcecrpkkd
Sequence, based on observed residues (ATOM records): (download)
>2fjhW (W:)
evvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndeglecvpte
esnitmqimrikphqgqhigemsflqhnkcecrpkkd