PDB entry 2eba

View 2eba on RCSB PDB site
Description: Crystal structure of the putative glutaryl-CoA dehydrogenase from thermus thermophilus
Class: oxidoreductase
Keywords: glutaryl-CoA dehydrogenase, thermus thermophilius, FAD, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, OXIDOREDUCTASE
Deposited on 2007-02-07, released 2007-04-01
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.21 Å
R-factor: 0.26
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative glutaryl-CoA dehydrogenase
    Species: Thermus thermophilus [TaxId:300852]
    Gene: TTHA0789
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2ebaa1, d2ebaa2
  • Chain 'C':
    Compound: Putative glutaryl-CoA dehydrogenase
    Species: Thermus thermophilus [TaxId:300852]
    Gene: TTHA0789
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2ebac1, d2ebac2
  • Chain 'D':
    Compound: Putative glutaryl-CoA dehydrogenase
    Species: Thermus thermophilus [TaxId:300852]
    Gene: TTHA0789
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2ebad1, d2ebad2
  • Chain 'E':
    Compound: Putative glutaryl-CoA dehydrogenase
    Species: Thermus thermophilus [TaxId:300852]
    Gene: TTHA0789
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2ebae1, d2ebae2
  • Chain 'F':
    Compound: Putative glutaryl-CoA dehydrogenase
    Species: Thermus thermophilus [TaxId:300852]
    Gene: TTHA0789
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2ebaf1, d2ebaf2
  • Chain 'G':
    Compound: Putative glutaryl-CoA dehydrogenase
    Species: Thermus thermophilus [TaxId:300852]
    Gene: TTHA0789
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2ebag1, d2ebag2
  • Chain 'H':
    Compound: Putative glutaryl-CoA dehydrogenase
    Species: Thermus thermophilus [TaxId:300852]
    Gene: TTHA0789
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2ebah1, d2ebah2
  • Chain 'I':
    Compound: Putative glutaryl-CoA dehydrogenase
    Species: Thermus thermophilus [TaxId:300852]
    Gene: TTHA0789
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2ebai1, d2ebai2
  • Heterogens: FAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2ebaA (A:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarregdtwvlngtkmwitngnlahlaviwakde
ggevlgflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplsc
ltqarfgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglll
awrlarlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnlet
vytyegthdvhtlvlgreitglnaf

    Sequence, based on observed residues (ATOM records): (download) 
    >2ebaA (A:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarrdtwvlngtkmwitngnlahlaviwakdevl
gflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplscltqar
fgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglllawrla
rlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnletvytye
gthdvhtlvlgreitglnaf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2ebaC (C:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarregdtwvlngtkmwitngnlahlaviwakde
ggevlgflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplsc
ltqarfgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglll
awrlarlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnlet
vytyegthdvhtlvlgreitglnaf

    Sequence, based on observed residues (ATOM records): (download) 
    >2ebaC (C:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarrdtwvlngtkmwitngnlahlaviwakdevl
gflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplscltqar
fgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglllawrla
rlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnletvytye
gthdvhtlvlgreitglnaf

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2ebaD (D:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarregdtwvlngtkmwitngnlahlaviwakde
ggevlgflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplsc
ltqarfgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglll
awrlarlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnlet
vytyegthdvhtlvlgreitglnaf

    Sequence, based on observed residues (ATOM records): (download) 
    >2ebaD (D:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarrdtwvlngtkmwitngnlahlaviwakdevl
gflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplscltqar
fgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglllawrla
rlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnletvytye
gthdvhtlvlgreitglnaf

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2ebaE (E:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarregdtwvlngtkmwitngnlahlaviwakde
ggevlgflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplsc
ltqarfgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglll
awrlarlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnlet
vytyegthdvhtlvlgreitglnaf

    Sequence, based on observed residues (ATOM records): (download) 
    >2ebaE (E:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarrdtwvlngtkmwitngnlahlaviwakdevl
gflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplscltqar
fgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglllawrla
rlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnletvytye
gthdvhtlvlgreitglnaf

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2ebaF (F:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarregdtwvlngtkmwitngnlahlaviwakde
ggevlgflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplsc
ltqarfgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglll
awrlarlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnlet
vytyegthdvhtlvlgreitglnaf

    Sequence, based on observed residues (ATOM records): (download) 
    >2ebaF (F:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarrdtwvlngtkmwitngnlahlaviwakdevl
gflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplscltqar
fgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglllawrla
rlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnletvytye
gthdvhtlvlgreitglnaf

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2ebaG (G:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarregdtwvlngtkmwitngnlahlaviwakde
ggevlgflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplsc
ltqarfgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglll
awrlarlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnlet
vytyegthdvhtlvlgreitglnaf

    Sequence, based on observed residues (ATOM records): (download) 
    >2ebaG (G:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarrdtwvlngtkmwitngnlahlaviwakdevl
gflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplscltqar
fgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglllawrla
rlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnletvytye
gthdvhtlvlgreitglnaf

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2ebaH (H:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarregdtwvlngtkmwitngnlahlaviwakde
ggevlgflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplsc
ltqarfgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglll
awrlarlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnlet
vytyegthdvhtlvlgreitglnaf

    Sequence, based on observed residues (ATOM records): (download) 
    >2ebaH (H:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarrdtwvlngtkmwitngnlahlaviwakdevl
gflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplscltqar
fgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglllawrla
rlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnletvytye
gthdvhtlvlgreitglnaf

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >2ebaI (I:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarregdtwvlngtkmwitngnlahlaviwakde
ggevlgflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplsc
ltqarfgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglll
awrlarlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnlet
vytyegthdvhtlvlgreitglnaf

    Sequence, based on observed residues (ATOM records): (download) 
    >2ebaI (I:)
mldfyaledlltpeekevqkaarrflekealphirdwweegvfpthliprfaelgflgpt
lppeyggagvssaayglicyelervdsglrsfvsvqsslvmypiyaygseeqkreflpkl
argemvgcfgltepdggsdpygnmktrarrdtwvlngtkmwitngnlahlaviwakdevl
gflvptdtpgfqarevkrkmslrasvtselvleevrvpeslrlpkalglkaplscltqar
fgiawgamgaleavyeeavafaksrstfgeplakkqlvqaklaemlawhteglllawrla
rlkdegkltpaqvslakrqnvwkalqaarmardilggsgitleyhairhmlnletvytye
gthdvhtlvlgreitglnaf