PDB entry 2e7l
View 2e7l on RCSB PDB site
Description: Structure of a high-affinity mutant of the 2C TCR in complex with Ld/QL9
Class: immune system
Keywords: tcr, MHC, immune system
Deposited on
2007-01-11, released
2007-04-24
The last revision prior to the SCOPe 2.02 freeze date was dated
2011-07-27, with a file datestamp of
2011-07-22.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.225
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Cytotoxic Tcell receptor
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot A2NTU7 (0-111)
- engineered mutation (42)
- engineered mutation (81)
- engineered mutation (93-97)
Domains in SCOPe 2.02: d2e7la_ - Chain 'B':
Compound: Cytotoxic Tcell receptor
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot A2NTU7
- engineered mutation (42)
- engineered mutation (81)
- engineered mutation (93-97)
Domains in SCOPe 2.02: d2e7lb_ - Chain 'C':
Compound: Beta-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot A2NTY6 (0-109)
- engineered mutation (16)
- engineered mutation (41)
- engineered mutation (46)
- engineered mutation (76)
- engineered mutation (79)
- engineered mutation (95)
- engineered mutation (98)
- engineered mutation (102)
- engineered mutation (107)
- see remark 999 (110-111)
Domains in SCOPe 2.02: d2e7lc_ - Chain 'D':
Compound: Beta-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot A2NTY6 (0-109)
- engineered mutation (16)
- engineered mutation (41)
- engineered mutation (46)
- engineered mutation (76)
- engineered mutation (79)
- engineered mutation (95)
- engineered mutation (98)
- engineered mutation (102)
- engineered mutation (107)
- see remark 999 (110-111)
Domains in SCOPe 2.02: d2e7ld_ - Chain 'E':
Compound: H-2 class I histocompatibility antigen, L-D alpha chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot P01897 (0-End)
- engineered mutation (14)
- engineered mutation (29)
- engineered mutation (48)
- engineered mutation (65)
- engineered mutation (96)
- engineered mutation (130)
- Chain 'F':
Compound: H-2 class I histocompatibility antigen, L-D alpha chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot P01897 (0-End)
- engineered mutation (14)
- engineered mutation (29)
- engineered mutation (48)
- engineered mutation (65)
- engineered mutation (96)
- engineered mutation (130)
- Chain 'P':
Compound: peptide (GLN)(LEU)(SER)(PRO)(PHE)(PRO)(PHE)(ASP)(LEU)
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'Q':
Compound: peptide (GLN)(LEU)(SER)(PRO)(PHE)(PRO)(PHE)(ASP)(LEU)
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2e7lA (A:)
qsvtqpdarvtvsegaslqlrckysysatpylfwyvqyprqgpqlllkyysgdpvvqgvn
gfeaefsksnssfhlrkasvhrsdsavyfcavshqgryltfgsgtkvivlpyn
Sequence, based on observed residues (ATOM records): (download)
>2e7lA (A:)
qsvtqpdarvtvsegaslqlrckysysatpylfwyvqyprqgpqlllkyysgdpvvqgvn
gfeaefsksnssfhlrkasvhrsdsavyfcavshqgryltfgsgtkvivlpy
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2e7lB (B:)
qsvtqpdarvtvsegaslqlrckysysatpylfwyvqyprqgpqlllkyysgdpvvqgvn
gfeaefsksnssfhlrkasvhrsdsavyfcavshqgryltfgsgtkvivlpyn
Sequence, based on observed residues (ATOM records): (download)
>2e7lB (B:)
svtqpdarvtvsegaslqlrckysysatpylfwyvqyprqgpqlllkyysgdpvvqgvng
feaefsksnssfhlrkasvhrsdsavyfcavshqgryltfgsgtkvivlp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2e7lC (C:)
eaavtqsprnkvavtgekvtlscnqtnnhnnmywyrqdtghelrliyysygagstekgdi
pdgykasrpsqenfsltlesatpsqtsvyfcasggggtlyfgagtrlsvlssalehhhhh
h
Sequence, based on observed residues (ATOM records): (download)
>2e7lC (C:)
eaavtqsprnkvavtgekvtlscnqtnnhnnmywyrqdtghelrliyysygagstekgdi
pdgykasrpsqenfsltlesatpsqtsvyfcasggggtlyfgagtrlsvlss
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2e7lD (D:)
eaavtqsprnkvavtgekvtlscnqtnnhnnmywyrqdtghelrliyysygagstekgdi
pdgykasrpsqenfsltlesatpsqtsvyfcasggggtlyfgagtrlsvlssalehhhhh
h
Sequence, based on observed residues (ATOM records): (download)
>2e7lD (D:)
eaavtqsprnkvavtgekvtlscnqtnnhnnmywyrqdtghelrliyysygagstekgdi
pdgykasrpsqenfsltlesatpsqtsvyfcasggggtlyfgagtrlsvlss
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.
- Chain 'P':
No sequence available.
- Chain 'Q':
No sequence available.