PDB entry 2dqt
View 2dqt on RCSB PDB site
Description: High resolution crystal structure of the complex of the hydrolytic antibody Fab 6D9 and a transition-state analog
Class: immune system
Keywords: catalytic antibody, ester hydrolysis, esterolytic, fab, immunoglobulin, immune system
Deposited on
2006-05-30, released
2006-06-20
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.187
AEROSPACI score: 0.51
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: immunoglobulin 6d9
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d2dqth1 - Chain 'L':
Compound: immunoglobulin 6d9
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d2dqtl1, d2dqtl2 - Heterogens: CPD, HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>2dqtH (H:)
evklvesggglvkpggslklscaasgftfsnyamswvrqtpekrlewvvsissggsiyyl
dsvkgrftvsrdnarnilylqmtslrsedtamyfcarvshydgsrdwyfdvwgagtsvtv
ssakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlq
sdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdc
Sequence, based on observed residues (ATOM records): (download)
>2dqtH (H:)
vklvesggglvkpggslklscaasgftfsnyamswvrqtpekrlewvvsissggsiyyld
svkgrftvsrdnarnilylqmtslrsedtamyfcarvshydgsrdwyfdvwgagtsvtvs
sakttppsvyplapgnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytl
sssvtvpsstwpsetvtcnvahpasstkvdkkivprdc
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>2dqtL (L:)
dvlmtqtplslpvslgdqasiscrssqtivhsngdtyldwflqkpgqspklliykvsnrf
sgvpdrfsgsgsgtdftlkisrveaedlgvyycfqgshvpptfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrnec