PDB entry 2dqn

View 2dqn on RCSB PDB site
Description: Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Asn
Class: ligase
Keywords: tRNA, amidotransferase, ligase
Deposited on 2006-05-29, released 2006-07-18
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: 0.234
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamyl-tRNA(Gln) amidotransferase subunit A
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: gatA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2dqna_
  • Chain 'B':
    Compound: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: gatB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2dqnb1, d2dqnb2
  • Chain 'C':
    Compound: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: gatC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2dqnc_
  • Heterogens: MG, ASN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2dqnA (A:)
msiryesvenlltlikdkkikpsdvvkdiydaieetdptiksflaldkenaikkaqelde
lqakdqmdgklfgipmgikdniitnglettcaskmlegfvpiyestvmeklhkenavlig
klnmdefamggstetsyfkktvnpfdhkavpggssggsaaavaaglvplslgsdtggsir
qpaaycgvvgmkptygrvsrfglvafassldqigpltrnvkdnaivleaisgadvndsts
apvddvdftseigkdikglkvalpkeylgegvaddvkeavqnavetlkslgavveevslp
ntkfgipsyyviasseassnlsrfdgirygyhskeahsleelykmsrsegfgkevkrrif
lgtfalssgyydayykksqkvrtlikndfdkvfenydvvvgptapttafnlgeeiddplt
myandllttpvnlaglpgisvpcgqsngrpiglqfigkpfdektlyrvayqyetqynlhd
vyekl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2dqnB (B:)
mhfetviglevhvelktdskmfspspahfgaepnsntnvidlaypgvlpvvnkravdwam
raamalnmeiateskfdrknyfypdnpkayqisqfdqpigengyidievdgetkrigitr
lhmeedagksthkgeyslvdlnrqgtplieivsepdirspkeayayleklrsiiqytgvs
dvkmeegslrcdanislrpygqekfgtkaelknlnsfnyvrkgleyeekrqeeellngge
igqetrrfdestgktilmrvkegsddyryfpepdivplyiddawkervrqtipelpderk
akyvnelglpaydahvltltkemsdffestiehgadvkltsnwlmggvneylnknqvell
dtkltpenlagmikliedgtmsskiakkvfpelaakggnakqimednglvqisdeatllk
fvnealdnneqsvedykngkgkamgflvgqimkaskgqanpqlvnqllkqeldkrlehhh
hhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2dqnB (B:)
fetviglevhvelktdskmfspspahfgaepnsntnvidlaypgvlpvvnkravdwamra
amalnmeiateskfdrknyfypdnpkayqisqfdqpigengyidievdgetkrigitrlh
meedagksthkgeyslvdlnrqgtplieivsepdirspkeayayleklrsiiqytgvsdv
kmeegslrcdanislrpygqekfgtkaelknlnsfnyvrkgleyeekrqeeellnggeig
qetrrfdestgktilmrvkegsddyryfpepdivplyiddawkervrqtipelpderkak
yvnelglpaydahvltltkemsdffestiehgadvkltsnwlmggvneylnknqvelldt
kltpenlagmikliedgtmsskiakkvfpelaakggnakqimedn

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2dqnC (C:)
mtkvtreevehianlarlqispeeteemantlesildfakqndsadtegveptyhvldlq
nvlredkaikgipqelalknaketedgqfkvptimneeda

    Sequence, based on observed residues (ATOM records): (download) 
    >2dqnC (C:)
kvtreevehianlarlqispeeteemantlesildfakqndsadtegveptyhvldlqnv
lredkaikgipqelalknaketedgqfkvptimneeda