PDB entry 2dlf
View 2dlf on RCSB PDB site
Description: high resolution crystal structure of the fv fragment from an anti-dansyl switch variant antibody igg2a(s) crystallized at ph 6.75
Class: immune system
Keywords: fv fragment, immunoglobulin, immune system
Deposited on
1998-12-17, released
1999-12-17
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: 0.184
AEROSPACI score: 0.61
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: protein (anti-dansyl immunoglobulin igg2a(s) (heavy chain))
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot P01801 (0-End)
- conflict (23)
- conflict (48)
- conflict (51)
- conflict (78-79)
- conflict (84)
- conflict (99)
- conflict (101-103)
- insertion (104)
- conflict (105)
Domains in SCOPe 2.04: d2dlfh_ - Chain 'L':
Compound: protein (anti-dansyl immunoglobulin igg2a(s)-kappa (light chain))
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot P01631 (0-112)
- conflict (16)
- conflict (100)
- conflict (104)
Domains in SCOPe 2.04: d2dlfl_ - Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>2dlfH (H:)
evkleesggglvqpggsmklscatsgftfsdawmdwvrqspekglewvaeirnkannhat
yyaesvkgrftisrddskrrvylqmntlraedtgiyyctgiyyhypwfaywgqgtlvtvs
aepr
Sequence, based on observed residues (ATOM records): (download)
>2dlfH (H:)
evkleesggglvqpggsmklscatsgftfsdawmdwvrqspekglewvaeirnkannhat
yyaesvkgrftisrddskrrvylqmntlraedtgiyyctgiyyhypwfaywgqgtlvtvs
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>2dlfL (L:)
dvvmtqtplslpvslgnqasiscrssqslvhsngntylhwylqkpgqspklliykvsnrf
sgvpdrfsgsgsgtdftlkisrveaedlgvyfcsqsthvpftfgsgtkleikr