PDB entry 2dep

View 2dep on RCSB PDB site
Description: Crystal Structure of xylanase B from Clostridium stercorarium F9
Class: hydrolase
Keywords: GLYCOSIDASE, XYLAN DEGRADATION, FAMILY 10, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, HYDROLASE
Deposited on 2006-02-16, released 2007-01-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-11, with a file datestamp of 2017-10-06.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thermostable celloxylanase
    Species: Clostridium stercorarium [TaxId:1510]
    Gene: xynB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P40942
      • see remark 999 (91-92)
      • see remark 999 (94)
    Domains in SCOPe 2.08: d2depa_
  • Chain 'B':
    Compound: Thermostable celloxylanase
    Species: Clostridium stercorarium [TaxId:1510]
    Gene: xynB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P40942
      • see remark 999 (91-92)
      • see remark 999 (94)
    Domains in SCOPe 2.08: d2depb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2depA (A:)
maedipslaeafrdyfpigaaiepgyttgqiaelykkhvnmlvaenamkpaslqptegnf
qwadadrivqfakengmelrfhtlvwhnqtpdwffldkegkpmveetdpqkreenrklll
qrlenyiravvlrykddikswdvvneviepndpggmrnspwyqitgteyievafratrea
ggsdiklyindyntddpvkrdilyelvknllekgvpidgvghqthidiynppveriiesi
kkfaglgldniiteldmsiyswndrsdygdsipdyiltlqakryqelfdalkenkdivsa
vvfwgisdkyswlngfpvkrtnapllfdrnfmpkpafwaivdpsrlrelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2depA (A:)
dipslaeafrdyfpigaaiepgyttgqiaelykkhvnmlvaenamkpaslqptegnfqwa
dadrivqfakengmelrfhtlvwhnqtpdwffldkegkpmveetdpqkreenrklllqrl
enyiravvlrykddikswdvvneviepndpggmrnspwyqitgteyievafratreaggs
diklyindyntddpvkrdilyelvknllekgvpidgvghqthidiynppveriiesikkf
aglgldniiteldmsiyswndrsdygdsipdyiltlqakryqelfdalkenkdivsavvf
wgisdkyswlngfpvkrtnapllfdrnfmpkpafwaivdp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2depB (B:)
maedipslaeafrdyfpigaaiepgyttgqiaelykkhvnmlvaenamkpaslqptegnf
qwadadrivqfakengmelrfhtlvwhnqtpdwffldkegkpmveetdpqkreenrklll
qrlenyiravvlrykddikswdvvneviepndpggmrnspwyqitgteyievafratrea
ggsdiklyindyntddpvkrdilyelvknllekgvpidgvghqthidiynppveriiesi
kkfaglgldniiteldmsiyswndrsdygdsipdyiltlqakryqelfdalkenkdivsa
vvfwgisdkyswlngfpvkrtnapllfdrnfmpkpafwaivdpsrlrelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2depB (B:)
ipslaeafrdyfpigaaiepgyttgqiaelykkhvnmlvaenamkpaslqptegnfqwad
adrivqfakengmelrfhtlvwhnqtpdwffldkegkpmveetdpqkreenrklllqrle
nyiravvlrykddikswdvvneviepndpggmrnspwyqitgteyievafratreaggsd
iklyindyntddpvkrdilyelvknllekgvpidgvghqthidiynppveriiesikkfa
glgldniiteldmsiyswndrsdygdsipdyiltlqakryqelfdalkenkdivsavvfw
gisdkyswlngfpvkrtnapllfdrnfmpkpafwaivdp