PDB entry 2cdf
View 2cdf on RCSB PDB site
Description: structure and binding kinetics of three different human cd1d-alpha-galactosylceramide-specific t cell receptors (tcr 5e)
Class: cell receptor
Keywords: cell receptor, cd1d, alpha-galactosylceramide, non-canonical tcr, tcr, t cell receptor, MHC class I, natural killer t cell, tcr 5e
Deposited on
2006-01-23, released
2006-03-07
The last revision prior to the SCOPe 2.04 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-31.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.192
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: tcr 5e
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d2cdfa1, d2cdfa2 - Chain 'B':
Compound: tcr 5e
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d2cdfb1, d2cdfb2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2cdfA (A:)
nqveqspqflsiqegenltvycnsssvfsslqwyrqepgegpvllvtvvtggevkklkrl
tfqfgdarkdsslhitaaqpgdtglylcagadrgstlgrlyfgrgtqltvwpdiqnpdpa
vyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnk
sdfacanafnn
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2cdfB (B:)
eadiyqtprylvigtgkkitlecsqtmghdkmywyqqdpgmelhlihysygvnstekgdl
ssestvsrirtehfpltlesarpshtsqylcassefrdgneklffgsgtqlsvledlnkv
fppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeq
palndsryalssrlrvsatfwqdprnhfrcqvqfyglsendewtqdrakpvtqivsaeaw
grad