PDB entry 2bsq

View 2bsq on RCSB PDB site
Description: fitab bound to DNA
Class: transcription
Keywords: transcription, transcription regulation complex, pin domain, ribbon-helix-helix, DNA binding, heterodimer
Deposited on 2005-05-23, released 2006-08-24
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.213
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: trafficking protein b
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5F882 (0-138)
      • engineered mutation (138)
    • PDB 2BSQ (36-71)
    Domains in SCOPe 2.06: d2bsqa1, d2bsqa2
  • Chain 'B':
    Compound: trafficking protein b
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5F882 (0-138)
      • engineered mutation (138)
    • PDB 2BSQ (36-71)
    Domains in SCOPe 2.06: d2bsqb1, d2bsqb2
  • Chain 'C':
    Compound: trafficking protein b
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5F882 (0-138)
      • engineered mutation (138)
    • PDB 2BSQ (36-71)
    Domains in SCOPe 2.06: d2bsqc1, d2bsqc2
  • Chain 'D':
    Compound: trafficking protein b
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5F882 (0-138)
      • engineered mutation (138)
    • PDB 2BSQ (36-71)
    Domains in SCOPe 2.06: d2bsqd1, d2bsqd2
  • Chain 'E':
    Compound: trafficking protein a
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2bsqe1
  • Chain 'F':
    Compound: trafficking protein a
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2bsqf1
  • Chain 'G':
    Compound: trafficking protein a
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2bsqg1
  • Chain 'H':
    Compound: trafficking protein a
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2bsqh1
  • Chain 'I':
    Compound: ir36, forward strand
    Species: NEISSERIA GONORRHOEAE, synthetic [TaxId:485]
  • Chain 'J':
    Compound: ir36, reverse strand
    Species: NEISSERIA GONORRHOEAE, synthetic [TaxId:485]
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2bsqA (A:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqA (A:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2bsqB (B:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqB (B:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhleh

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2bsqC (C:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqC (C:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhh

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2bsqD (D:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqD (D:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhleh

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2bsqE (E:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrgrntdnevsl

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqE (E:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrgr

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2bsqF (F:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrgrntdnevsl

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqF (F:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veled

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2bsqG (G:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrgrntdnevsl

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqG (G:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrg

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2bsqH (H:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrgrntdnevsl

    Sequence, based on observed residues (ATOM records): (download) 
    >2bsqH (H:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
vele

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.