PDB entry 2bpf

View 2bpf on RCSB PDB site
Description: structures of ternary complexes of rat DNA polymerase beta, a DNA template-primer, and ddctp
Class: transferase/DNA
Keywords: protein-DNA complex, transferase/DNA complex
Deposited on 1994-05-19, released 1994-08-31
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.193
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (DNA polymerase beta (e.c.2.7.7.7))
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2bpfa1, d2bpfa3, d2bpfa4
  • Chain 'P':
    Compound: DNA (5'-d(*cp*gp*gp*cp*gp*cp*c)-3')
  • Chain 'T':
    Compound: DNA (5'-d(*gp*gp*gp*cp*gp*cp*cp*g)-3')
  • Heterogens: MG, DCT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2bpfA (A:)
mskrkapqetlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeak
klpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegik
tledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgs
frrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcq
lpsendeneyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirp
lgvtgvageplpvdseqdifdyiqwryrepkdrse

    Sequence, based on observed residues (ATOM records): (download) 
    >2bpfA (A:)
etlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtk
iaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrkn
edklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaess
gdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcqlpseneyp
hrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvagepl
pvdseqdifdyiqwryrepkdrse

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.