PDB entry 2ba0

View 2ba0 on RCSB PDB site
Description: Archaeal exosome core
Class: RNA binding protein
Keywords: exosome, RNAse ph, RNA degradation, exoribonuclease, RNA binding, s1domain, kh domain, archaeal
Deposited on 2005-10-13, released 2005-11-22
The last revision prior to the SCOP 1.75 freeze date was dated 2005-11-22, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.216
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Archeal exosome RNA binding protein RRP4
    Species: Archaeoglobus fulgidus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ba0a1, d2ba0a2, d2ba0a3
  • Chain 'B':
    Compound: Archeal exosome RNA binding protein RRP4
    Species: Archaeoglobus fulgidus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ba0b1, d2ba0b2, d2ba0b3
  • Chain 'C':
    Compound: Archeal exosome RNA binding protein RRP4
    Species: Archaeoglobus fulgidus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ba0c1, d2ba0c2, d2ba0c3
  • Chain 'D':
    Compound: Archeal exosome RNA binding protein RRP41
    Species: Archaeoglobus fulgidus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ba0d1, d2ba0d2
  • Chain 'E':
    Compound: Archeal exosome RNA binding protein RRP41
    Species: Archaeoglobus fulgidus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ba0e1, d2ba0e2
  • Chain 'F':
    Compound: Archeal exosome RNA binding protein RRP41
    Species: Archaeoglobus fulgidus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ba0f1, d2ba0f2
  • Chain 'G':
    Compound: Archeal exosome RNA binding protein RRP42
    Species: Archaeoglobus fulgidus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ba0g1, d2ba0g2
  • Chain 'H':
    Compound: Archeal exosome RNA binding protein RRP42
    Species: Archaeoglobus fulgidus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ba0h1, d2ba0h2
  • Chain 'I':
    Compound: Archeal exosome RNA binding protein RRP42
    Species: Archaeoglobus fulgidus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ba0i1, d2ba0i2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2ba0A (A:)
mrkivlpgdllstnpraagygtyveggkvyakiiglfdqtethvrviplkgrytpsvgdv
vigiirevaangwavdiyspyqaflpvsenpemkpnkkpnevldigdaiiakvlnidpkm
kvtltmkdricrpirfgrivainparvprvigkkgsmikllkseldvqivvgqngliwvn
gdrrkvsiaeeaiylieqeahtegltdrvaefikrrkadvgiqhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba0A (A:)
rkivlpgdllstnpraagygtyveggkvyakiiglfdqtethvrviplkgrytpsvgdvv
igiirevaangwavdiyspyqaflpvsenpemkpnkkpnevldigdaiiakvlnidpkmk
vtltmkdricrpirfgrivainparvprvigkkgsmikllkseldvqivvgqngliwvng
drrkvsiaeeaiylieqeahtegltdrvaefikrrkad

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2ba0B (B:)
mrkivlpgdllstnpraagygtyveggkvyakiiglfdqtethvrviplkgrytpsvgdv
vigiirevaangwavdiyspyqaflpvsenpemkpnkkpnevldigdaiiakvlnidpkm
kvtltmkdricrpirfgrivainparvprvigkkgsmikllkseldvqivvgqngliwvn
gdrrkvsiaeeaiylieqeahtegltdrvaefikrrkadvgiqhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba0B (B:)
rkivlpgdllstnpraagygtyveggkvyakiiglfdqtethvrviplkgrytpsvgdvv
igiirevaangwavdiyspyqaflpvsenpemkpnkkpnevldigdaiiakvlnidpkmk
vtltmkdricrpirfgrivainparvprvigkkgsmikllkseldvqivvgqngliwvng
drrkvsiaeeaiylieqeahtegltdrvaefikrrkadvgiq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2ba0C (C:)
mrkivlpgdllstnpraagygtyveggkvyakiiglfdqtethvrviplkgrytpsvgdv
vigiirevaangwavdiyspyqaflpvsenpemkpnkkpnevldigdaiiakvlnidpkm
kvtltmkdricrpirfgrivainparvprvigkkgsmikllkseldvqivvgqngliwvn
gdrrkvsiaeeaiylieqeahtegltdrvaefikrrkadvgiqhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba0C (C:)
rkivlpgdllstnpraagygtyveggkvyakiiglfdqtethvrviplkgrytpsvgdvv
igiirevaangwavdiyspyqaflpvsenpemkpnkkpnevldigdaiiakvlnidpkmk
vtltmkdricrpirfgrivainparvprvigkkgsmikllkseldvqivvgqngliwvng
drrkvsiaeeaiylieqeahtegltdrvaefikrrkad

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2ba0D (D:)
msefnekpeklivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgpr
evhprhlqdpskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfpr
saidifvevlqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeed
nfgeadmpfaflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrr
yievgeemdeiteggeda

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba0D (D:)
klivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgprevhprhlqd
pskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfprsaidifvev
lqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeednfgeadmpf
aflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrryievgeemd
eit

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2ba0E (E:)
msefnekpeklivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgpr
evhprhlqdpskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfpr
saidifvevlqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeed
nfgeadmpfaflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrr
yievgeemdeiteggeda

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba0E (E:)
klivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgprevhprhlqd
pskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfprsaidifvev
lqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeednfgeadmpf
aflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrryievgeemd
eit

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2ba0F (F:)
msefnekpeklivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgpr
evhprhlqdpskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfpr
saidifvevlqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeed
nfgeadmpfaflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrr
yievgeemdeiteggeda

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba0F (F:)
kpeklivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgprevhprh
lqdpskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfprsaidif
vevlqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeednfgead
mpfaflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrryievge
emdeit

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2ba0G (G:)
mpedilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvv
gvkmqpgepypdtpdrgviivnaelvplasptfepgppdensielarvvdrgireseavd
lsklvieegekvwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpv
rdlpvsvtslivgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfde
lldvsincarklrekfkei

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba0G (G:)
edilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvvgv
kmqpgepypdtpdrgviivnaelvplasptfepgppdensielarvvdrgireseavdls
klvieegekvwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpvrd
lpvsvtslivgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfdell
dvsincarklrekfk

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2ba0H (H:)
mpedilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvv
gvkmqpgepypdtpdrgviivnaelvplasptfepgppdensielarvvdrgireseavd
lsklvieegekvwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpv
rdlpvsvtslivgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfde
lldvsincarklrekfkei

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba0H (H:)
edilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvvgv
kmqpgepypdtpdrgviivnaelvplasptfepgppdensielarvvdrgireseavdls
klvieegekvwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpvrd
lpvsvtslivgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfdell
dvsincarklrekfke

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >2ba0I (I:)
mpedilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvv
gvkmqpgepypdtpdrgviivnaelvplasptfepgppdensielarvvdrgireseavd
lsklvieegekvwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpv
rdlpvsvtslivgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfde
lldvsincarklrekfkei

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba0I (I:)
edilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvvgv
kmqpgepypdtpdrgviivnaelvplasptfeppdensielarvvdrgireseavdlskl
vieegekvwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpvrdlp
vsvtslivgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfdelldv
sincarklrekfk