PDB entry 2b2x
View 2b2x on RCSB PDB site
Description: VLA1 RdeltaH I-domain complexed with a quadruple mutant of the AQC2 Fab
Class: Immune system
Keywords: computational design, antibody-antigen complex, Immune system
Deposited on
2005-09-19, released
2006-04-18
The last revision prior to the SCOPe 2.04 freeze date was dated
2011-11-16, with a file datestamp of
2011-11-11.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.241
AEROSPACI score: 0.33
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: integrin alpha-1
Species: Rattus norvegicus [TaxId:10116]
Gene: Itga1
Database cross-references and differences (RAF-indexed):
- Uniprot P18614
- engineered (92-94)
- engineered (97)
Domains in SCOPe 2.04: d2b2xa_ - Chain 'B':
Compound: integrin alpha-1
Species: Rattus norvegicus [TaxId:10116]
Gene: Itga1
Database cross-references and differences (RAF-indexed):
- Uniprot P18614
- engineered (92-94)
- engineered (97)
Domains in SCOPe 2.04: d2b2xb_ - Chain 'H':
Compound: Antibody AQC2 Fab
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: Antibody AQC2 Fab
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: Antibody AQC2 Fab
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d2b2xl1, d2b2xl2 - Chain 'M':
Compound: Antibody AQC2 Fab
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d2b2xm1, d2b2xm2 - Heterogens: MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2b2xA (A:)
gsvsptfqvvnsfapvqecstqldivivldgsnsiypwesviaflndllkrmdigpkqtq
vgivqygenvthefnlnkyssteevlvaankivqrggrqtmtalgidtarkeaftearga
rrgvkkvmvivtdgeshdnyrlkqviqdcedeniqrfsiailghynrgnlstekfveeik
siaseptekhffnvsdelalvtivkalgerifalealerphrd
Sequence, based on observed residues (ATOM records): (download)
>2b2xA (A:)
qldivivldgsnsiypwesviaflndllkrmdigpkqtqvgivqygenvthefnlnkyss
teevlvaankivqrggrqtmtalgidtarkeafteargarrgvkkvmvivtdgeshdnyr
lkqviqdcedeniqrfsiailghynlstekfveeiksiaseptekhffnvsdelalvtiv
kalgerif
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2b2xB (B:)
gsvsptfqvvnsfapvqecstqldivivldgsnsiypwesviaflndllkrmdigpkqtq
vgivqygenvthefnlnkyssteevlvaankivqrggrqtmtalgidtarkeaftearga
rrgvkkvmvivtdgeshdnyrlkqviqdcedeniqrfsiailghynrgnlstekfveeik
siaseptekhffnvsdelalvtivkalgerifalealerphrd
Sequence, based on observed residues (ATOM records): (download)
>2b2xB (B:)
ldivivldgsnsiypwesviaflndllkrgpkqtqvgivqygenvthefnlnkyseevlv
aankivqrggrqtmtalgidtarkeafteargarkvmvivtdgeshdnyrlkqviqdced
eniqrfsiailghystekfveeiksiaseptekhffnvsdelalvtivkalgerif
- Chain 'H':
No sequence available.
- Chain 'I':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>2b2xL (L:)
qiqltqspsslsasvgdrvtitcsassqvnhmfwyqqkpgkapkpwiyltsylasgvpsr
fsgsgsgtdytltisslqpedfatyycqqwsgnpwtfgqgtkveikradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>2b2xL (L:)
qiqltqspsslsasvgdrvtitcsassqvnhmfwyqqkpgkapkpwiyltsylasgvpsr
fsgsgsgtdytltisslqpedfatyycqqwsgnpwtfgqgtkveikradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnr
- Chain 'M':
Sequence, based on SEQRES records: (download)
>2b2xM (M:)
qiqltqspsslsasvgdrvtitcsassqvnhmfwyqqkpgkapkpwiyltsylasgvpsr
fsgsgsgtdytltisslqpedfatyycqqwsgnpwtfgqgtkveikradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>2b2xM (M:)
qiqltqspsslsasvgdrvtitcsassqvnhmfwyqqkpgkapkpwiyltsylasgvpsr
fsgsgsgtdytltisslqpedfatyycqqwsgnpwtfgqgtkveikradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnr