PDB entry 2aj3
View 2aj3 on RCSB PDB site
Description: Crystal Structure of a Cross-Reactive HIV-1 Neutralizing CD4-Binding Site Antibody Fab m18
Class: immune system
Keywords: HIV, antibody, Fab, CD4-binding, immunoglobulin, IMMUNE SYSTEM
Deposited on
2005-08-01, released
2006-03-28
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.03 Å
R-factor: 0.225
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Fab m18, Light Chain
Species: Homo sapiens [TaxId:9606]
Gene: Fab
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2aj3a1, d2aj3a2 - Chain 'B':
Compound: Fab m18, Heavy Chain
Species: Homo sapiens [TaxId:9606]
Gene: Fab
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Fab m18, Light Chain
Species: Homo sapiens [TaxId:9606]
Gene: Fab
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2aj3c1, d2aj3c2 - Chain 'D':
Compound: Fab m18, Heavy Chain
Species: Homo sapiens [TaxId:9606]
Gene: Fab
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: Fab m18, Light Chain
Species: Homo sapiens [TaxId:9606]
Gene: Fab
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2aj3e1, d2aj3e2 - Chain 'F':
Compound: Fab m18, Heavy Chain
Species: Homo sapiens [TaxId:9606]
Gene: Fab
Database cross-references and differences (RAF-indexed):
- Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2aj3A (A:)
lqmtqspsflsasvgdrvsitcrasqdiqkflawyqltpgdapkllmysastlqsgvpsr
fsgsgsgteftltisglqpedfatyycqhlkrypytfgqgtkleisrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdnkdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>2aj3A (A:)
lqmtqspsflsasvgdrvsitcrasqdiqkflawyqltpgdapkllmysastlqsgvpsr
fsgsgsgteftltisglqpedfatyycqhlkrypytfgqgtkleisrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdnkdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrge
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2aj3C (C:)
lqmtqspsflsasvgdrvsitcrasqdiqkflawyqltpgdapkllmysastlqsgvpsr
fsgsgsgteftltisglqpedfatyycqhlkrypytfgqgtkleisrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdnkdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>2aj3C (C:)
lqmtqspsflsasvgdrvsitcrasqdiqkflawyqltpgdapkllmysastlqsgvpsr
fsgsgsgteftltisglqpedfatyycqhlkrypytfgqgtkleisrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdnkdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrge
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2aj3E (E:)
lqmtqspsflsasvgdrvsitcrasqdiqkflawyqltpgdapkllmysastlqsgvpsr
fsgsgsgteftltisglqpedfatyycqhlkrypytfgqgtkleisrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdnkdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>2aj3E (E:)
lqmtqspsflsasvgdrvsitcrasqdiqkflawyqltpgdapkllmysastlqsgvpsr
fsgsgsgteftltisglqpedfatyycqhlkrypytfgqgtkleisrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdnkdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrge
- Chain 'F':
No sequence available.