PDB entry 2adf
View 2adf on RCSB PDB site
Description: Crystal Structure and Paratope Determination of 82D6A3, an Antithrombotic Antibody Directed Against the von Willebrand factor A3-Domain
Class: blood clotting/immune system
Keywords: on Willebrand factor, A3-domain, 82D6A3, collagen binding, paratope, epitope, crystal structure, antithrombotic, BLOOD CLOTTING/IMMUNE SYSTEM COMPLEX
Deposited on
2005-07-20, released
2005-12-06
The last revision prior to the SCOP 1.73 freeze date was dated
2007-09-25, with a file datestamp of
2007-09-21.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.192
AEROSPACI score: 0.47
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: von willebrand factor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d2adfa1 - Chain 'H':
Compound: 82D6A3 IgG
Species: MUS MUSCULUS
Domains in SCOP 1.73: d2adfh1 - Chain 'L':
Compound: 82D6A3 IgG
Species: MUS MUSCULUS
Domains in SCOP 1.73: d2adfl1, d2adfl2 - Heterogens: SO4, ACY, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2adfA (A:)
gshmapdcsqpldvillldgsssfpasyfdemksfakafiskanigprltqvsvlqygsi
ttidvpwnvvpekahllslvdvmqreggpsqigdalgfavryltsemhgarpgaskavvi
lvtdvsvdsvdaaadaarsnrvtvfpigigdrydaaqlrilagpagdsnvvklqriedlp
tmvtlgnsflhklcsg
Sequence, based on observed residues (ATOM records): (download)
>2adfA (A:)
dcsqpldvillldgsssfpasyfdemksfakafiskanigprltqvsvlqygsittidvp
wnvvpekahllslvdvmqreggpsqigdalgfavryltsemhgarpgaskavvilvtdvs
vdsvdaaadaarsnrvtvfpigigdrydaaqlrilagpagdsnvvklqriedlptmvtlg
nsflhklcs
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>2adfH (H:)
qiqlvqsgpelkkpgetvkisckasgytfinygmnwvkqapgkglkwmgwkntntgetty
geefrgrfafsletsvstaylqinnlknedtatyfcardnpyyaldywgqgttvtvssak
ttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsdly
tlsssvtvtsstwpsqsitcnvahpasstkvdkkiepr
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>2adfL (L:)
diqmtqspsslsaslggkvtitckasqdinkyiawyqhkpgkgprllihytstlqpgips
rfsgsgsgrdysfsisnlepediatyyclqydnlrtfgggtkleikradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfn