PDB entry 2aab
View 2aab on RCSB PDB site
Description: Structural basis of antigen mimicry in a clinically relevant melanoma antigen system
Class: immune system
Keywords: Anti-idiotypic antibody, molecular mimicry, melanoma, immunotherapy, immune system
Deposited on
2005-07-13, released
2005-10-25
The last revision prior to the SCOPe 2.03 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.236
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: anti-idiotypic monoclonal antibody (heavy chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2aabh1 - Chain 'L':
Compound: anti-idiotypic monoclonal antibody (light chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2aabl1, d2aabl2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>2aabH (H:)
dvqlvesggglvqpggsrklscaasgftfssfgmhwvrqapekglewvayissdssniyy
adtvkgrftisrdnpkntlflqmtslrsedtamyycarsnyvgyhvrwyfdvwgagttvt
vssakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavl
qsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdcgckpcictvpevssv
fif
Sequence, based on observed residues (ATOM records): (download)
>2aabH (H:)
dvqlvesggglvqpggsrklscaasgftfssfgmhwvrqapekglewvayissdssniyy
adtvkgrftisrdnpkntlflqmtslrsedtamyycarsnyvgyhvrwyfdvwgagttvt
vssakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavl
qsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprd
- Chain 'L':
Sequence, based on SEQRES records: (download)
>2aabL (L:)
diqltqspaslavslgqrvtiscrasesveyygsslmqwyqqkpgqppklliyaasnves
gvparfsgsgsgtdfslnihpveeddiamyfcqqsrkipytfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>2aabL (L:)
diqltqspaslavslgqrvtiscrasesveyygsslmqwyqqkpgqppklliyaasnves
gvparfsgsgsgtdfslnihpveeddiamyfcqqsrkipytfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrge