PDB entry 2a6k
View 2a6k on RCSB PDB site
Description: Crystal Structure Analysis of the germline antibody 36-65 Fab in complex with the dodecapeptide SLGDNLTNHNLR
Class: immune system
Keywords: Immunoglobulin fold, Fab-peptide complex, IMMUNE SYSTEM
Deposited on
2005-07-03, released
2006-06-13
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-03-21, with a file datestamp of
2018-03-16.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.12
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Germline antibody 36-65 Fab light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Germline antibody 36-65 Fab heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2a6kb2, d2a6kb3 - Chain 'H':
Compound: Germline antibody 36-65 Fab heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2a6kh2, d2a6kh3 - Chain 'L':
Compound: Germline antibody 36-65 Fab light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'P':
Compound: dodecapeptide: slgdnltnhnlr
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2a6kB (B:)
evqlqqsgaelvragssvkmsckasgytftsyginwvkqrpgqglewigyinpgngytky
nekfkgkttltvdkssstaymqlrsltsedsavyfcarsvyyggsyyfdywgqgttltvs
sakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqs
dlytlsssvtvpssprpsetvtcnvahpasstkvdkkivprd
Sequence, based on observed residues (ATOM records): (download)
>2a6kB (B:)
evqlqqsgaelvragssvkmsckasgytftsyginwvkqrpgqglewigyinpgngytky
nekfkgkttltvdkssstaymqlrsltsedsavyfcarsvyyggsyyfdywgqgttltvs
sakttppsvyplapgsnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlyt
lsssvtvpssprpsetvtcnvahpasstkvdkkivprd
- Chain 'H':
Sequence, based on SEQRES records: (download)
>2a6kH (H:)
evqlqqsgaelvragssvkmsckasgytftsyginwvkqrpgqglewigyinpgngytky
nekfkgkttltvdkssstaymqlrsltsedsavyfcarsvyyggsyyfdywgqgttltvs
sakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqs
dlytlsssvtvpssprpsetvtcnvahpasstkvdkkivprd
Sequence, based on observed residues (ATOM records): (download)
>2a6kH (H:)
evqlqqsgaelvragssvkmsckasgytftsyginwvkqrpgqglewigyinpgngytky
nekfkgkttltvdkssstaymqlrsltsedsavyfcarsvyyggsyyfdywgqgttltvs
sakttppsvyplapgsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytls
ssvtvpssprpsetvtcnvahpasstkvdkkivprd
- Chain 'L':
No sequence available.
- Chain 'P':
No sequence available.