PDB entry 1zeo

View 1zeo on RCSB PDB site
Description: Crystal Structure of Human PPAR-gamma Ligand Binding Domain Complexed with an Alpha-Aryloxyphenylacetic Acid Agonist
Class: transcription
Keywords: Nuclear receptor, Ligand Binding Domain, LBD, Alpha helix sandwich, PPAR-RXR heterodimer
Deposited on 2005-04-19, released 2006-04-25
The last revision prior to the SCOP 1.73 freeze date was dated 2006-04-25, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.219
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peroxisome proliferator activated receptor gamma
    Species: HOMO SAPIENS
    Gene: PPARG, NR1C3
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1zeoa1
  • Chain 'B':
    Compound: Peroxisome proliferator activated receptor gamma
    Species: HOMO SAPIENS
    Gene: PPARG, NR1C3
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1zeob1
  • Heterogens: C01, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1zeoA (A:)
gsqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmged
kikfkhitplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllky
gvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnaleld
dsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmt
dlrqivtehvqllqvikktetdmslhpllqeiykdly

    Sequence, based on observed residues (ATOM records): (download) 
    >1zeoA (A:)
esadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikeqs
kevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslm
nkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviils
gdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllq
vikktetdmslhpllqeiykdly

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1zeoB (B:)
gsqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmged
kikfkhitplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllky
gvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnaleld
dsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmt
dlrqivtehvqllqvikktetdmslhpllqeiykdly

    Sequence, based on observed residues (ATOM records): (download) 
    >1zeoB (B:)
esadlralakhlydsyiksfpltkakarailtgkdkspfviydmnslmmgedevairifq
gcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlise
gqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnv
kpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktehpl
lqeiykd