PDB entry 1z3g

View 1z3g on RCSB PDB site
Description: Crystal structure of complex between Pvs25 and Fab fragment of malaria transmission blocking antibody 2A8
Class: immune system/cell adhesion
Keywords: 2A8 Fab, Pvs25
Deposited on 2005-03-12, released 2005-12-06
The last revision prior to the SCOP 1.75 freeze date was dated 2006-01-17, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 3.3 Å
R-factor: 0.275
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ookinete surface protein Pvs25
    Species: Plasmodium vivax
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: ookinete surface protein Pvs25
    Species: Plasmodium vivax
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: 2A8 Fab Heavy Chain
    Species: MUS MUSCULUS
    Domains in SCOP 1.75: d1z3gh1
  • Chain 'I':
    Compound: 2A8 Fab Heavy Chain
    Species: MUS MUSCULUS
    Domains in SCOP 1.75: d1z3gi1
  • Chain 'L':
    Compound: 2A8 Fab Light Chain
    Species: MUS MUSCULUS
    Domains in SCOP 1.75: d1z3gl1, d1z3gl2
  • Chain 'M':
    Compound: 2A8 Fab Light Chain
    Species: MUS MUSCULUS
    Domains in SCOP 1.75: d1z3gm1, d1z3gm2

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1z3gH (H:)
qvqlqqpgaelvkpgasvklsckasgytftsywmhwvkqrpgqglewigmihphsgstny
nekfkskatltvdkssstaymqlssltsedsavyycargwdvaywgqgtlvtvsaakttp
psvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytls
ssvtvpsstwpsetvtcnvahpasstkvdkkivprd

    Sequence, based on observed residues (ATOM records): (download) 
    >1z3gH (H:)
qlqqpgaelvkpgasvklsckasgytftsywmhwvkqrpgqglewigmihphsgstnyne
kfkskatltvdkssstaymqlssltsedsavyycargwdvaywgqgtlvtvsaakttpps
vyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsss
vtvpsstwpsetvtcnvahpasstkvdkkivprd

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >1z3gI (I:)
qvqlqqpgaelvkpgasvklsckasgytftsywmhwvkqrpgqglewigmihphsgstny
nekfkskatltvdkssstaymqlssltsedsavyycargwdvaywgqgtlvtvsaakttp
psvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytls
ssvtvpsstwpsetvtcnvahpasstkvdkkivprd

    Sequence, based on observed residues (ATOM records): (download) 
    >1z3gI (I:)
qlqqpgaelvkpgasvklsckasgytftsywmhwvkqrpgqglewigmihphsgstnyne
kfkskatltvdkssstaymqlssltsedsavyycargwdvaywgqgtlvtvsaakttpps
vyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsss
vtvpsstwpsetvtcnvahpasstkvdkkivprd

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1z3gL (L:)
qivltqspaimsaspgekvtmtcsasssvsymnwyqqksgtspkrwiydtsklasgvpah
frgsgsgtsysltisgmeaedaatyycqqwssnpptfgsgtkleinradtaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnrnec

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1z3gM (M:)
qivltqspaimsaspgekvtmtcsasssvsymnwyqqksgtspkrwiydtsklasgvpah
frgsgsgtsysltisgmeaedaatyycqqwssnpptfgsgtkleinradtaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnrnec