PDB entry 1yyp
View 1yyp on RCSB PDB site
Description: Crystal structure of cytomegalovirus UL44 bound to C-terminal peptide from CMV UL54
Class: replication/transferase
Keywords: processivity fold (same fold as hsv ul42, pcna, and homotrimeric sliding clamps), replication-transferase complex
Deposited on
2005-02-25, released
2005-12-27
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-01-24, with a file datestamp of
2018-01-19.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase processivity factor
Species: Human herpesvirus 5 [TaxId:10359]
Gene: UL44
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yypa1, d1yypa2 - Chain 'B':
Compound: DNA polymerase
Database cross-references and differences (RAF-indexed):
- Heterogens: SO4, EDO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yypA (A:)
mdrktrlsepptlalrlkpyktaiqqlrsviralkenttvtflptpslilqtvrshcvsk
itfnssclyitdksfqpktinnstpllgnfmyltsskdltkfyvqdisdlsakismcapd
fnmefssacvhgqdivresensavhvdldfgvvadllkwigphtrvkrnvkkapcptgtv
qilvhagppaikfiltngseleftsnnrvsfhgvknmrinvqlknfyqtllncavtklpc
tlrivtehdtllyvasrnglfavenflteepfqrgdpfdknyvgnsgksr
Sequence, based on observed residues (ATOM records): (download)
>1yypA (A:)
epptlalrlkpyktaiqqlrsviralkenttvtflptpslilqtvrshcvskitfnsscl
yitdksfqpktinnstpllgnfmyltsskdltkfyvqdisdlsakismcapdfnmefssa
cvhgqdivresensavhvdldfgvvadllkwigptgtvqilvhagppaikfiltngsele
ftsnnrvsfhgvknmrinvqlknfyqtllncavtklpctlrivtehdtllyvasrnglfa
venflteep
- Chain 'B':
No sequence available.