PDB entry 1ynr

View 1ynr on RCSB PDB site
Description: Crystal structure of the cytochrome c-552 from Hydrogenobacter thermophilus at 2.0 resolution
Class: Electron transpor
Keywords: helix
Deposited on 2005-01-25, released 2005-05-17
The last revision prior to the SCOP 1.73 freeze date was dated 2005-07-19, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.173
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cytochrome c-552
    Species: Hydrogenobacter thermophilus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1ynra1
  • Chain 'B':
    Compound: Cytochrome c-552
    Species: Hydrogenobacter thermophilus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1ynrb1
  • Chain 'C':
    Compound: Cytochrome c-552
    Species: Hydrogenobacter thermophilus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1ynrc1
  • Chain 'D':
    Compound: Cytochrome c-552
    Species: Hydrogenobacter thermophilus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1ynrd1
  • Heterogens: SO4, HEC, MPD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ynrA (A:)
neqlakqkgcmachdlkakkvgpayadvakkyagrkdavdylagkikkggsgvwgsvpmp
pqnvtdaeakqlaqwilsik

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ynrB (B:)
neqlakqkgcmachdlkakkvgpayadvakkyagrkdavdylagkikkggsgvwgsvpmp
pqnvtdaeakqlaqwilsik

    Sequence, based on observed residues (ATOM records): (download) 
    >1ynrB (B:)
neqlakqkgcmachdlkakkvgpayadvakkyagrkdavdylagkikkggsgvwgsvpmp
pqnvtdaeakqlaqwilsi

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ynrC (C:)
neqlakqkgcmachdlkakkvgpayadvakkyagrkdavdylagkikkggsgvwgsvpmp
pqnvtdaeakqlaqwilsik

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1ynrD (D:)
neqlakqkgcmachdlkakkvgpayadvakkyagrkdavdylagkikkggsgvwgsvpmp
pqnvtdaeakqlaqwilsik

    Sequence, based on observed residues (ATOM records): (download) 
    >1ynrD (D:)
neqlakqkgcmachdlkakkvgpayadvakkyagrkdavdylagkikkggsgvwgsvpmp
pqnvtdaeakqlaqwilsi