PDB entry 1ykw

View 1ykw on RCSB PDB site
Description: Crystal Structure of a Novel RuBisCO-Like Protein from the Green Sulfur Bacterium Chlorobium tepidum
Class: unknown function
Keywords: beta-alpha-barrel
Deposited on 2005-01-18, released 2005-05-17
The last revision prior to the SCOP 1.73 freeze date was dated 2005-05-17, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.203
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RuBisCO-like protein
    Species: Chlorobium tepidum
    Gene: CT1772
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KBL4
      • engineered (327)
    Domains in SCOP 1.73: d1ykwa1, d1ykwa2
  • Chain 'B':
    Compound: RuBisCO-like protein
    Species: Chlorobium tepidum
    Gene: CT1772
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KBL4
      • engineered (327)
    Domains in SCOP 1.73: d1ykwb1, d1ykwb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ykwA (A:)
mnaedvkgffasresldmeqylvldyylesvgdietalahfcseqstaqwkrvgvdedfr
lvhaakvidyevieeleqlsypvkhsetgkihacrvtiahphcnfgpkipnlltavcgeg
tyftpgvpvvklmdihfpdtyladfegpkfgieglrdilnahgrpiffgvvkpniglspg
efaeiayqswlggldiakddemladvtwssieeraahlgkarrkaeaetgepkiylanit
devdslmekhdvavrnganallinalpvglsavrmlsnytqvplighfpfiasfsrmeky
gihskvmtklqrlagldavimpgfgdrvmtpeeevlenviectkpmgrikpclpvpggsd
saltlqtvyekvgnvdfgfvpgrgvfghpmgpkagaksirqaweaieqgisietwaethp
elqamvdqsllkkqd

    Sequence, based on observed residues (ATOM records): (download) 
    >1ykwA (A:)
edvkgffasresldmeqylvldyylesvgdietalahfcseqstfrlvhaakvidyevie
eleqlsypvkhsetgkihacrvtiahphcnfgpkipnlltavcgegtyftpgvpvvklmd
ihfpdtyladfegpkfgieglrdilnahgrpiffgvvkpniglspgefaeiayqswlggl
diakddemladvtwssieeraahlgkarrkaeaetgepkiylanitdevdslmekhdvav
rnganallinalpvglsavrmlsnytqvplighfpfiasfsrmekygihskvmtklqrla
gldavimpgfgdrvmtpeeevlenviectkpmgrikpclpvpggsdsaltlqtvyekvgn
vdfgfvpgrgvfghpmgpkagaksirqaweaieqgisietwaethpelqamvdq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ykwB (B:)
mnaedvkgffasresldmeqylvldyylesvgdietalahfcseqstaqwkrvgvdedfr
lvhaakvidyevieeleqlsypvkhsetgkihacrvtiahphcnfgpkipnlltavcgeg
tyftpgvpvvklmdihfpdtyladfegpkfgieglrdilnahgrpiffgvvkpniglspg
efaeiayqswlggldiakddemladvtwssieeraahlgkarrkaeaetgepkiylanit
devdslmekhdvavrnganallinalpvglsavrmlsnytqvplighfpfiasfsrmeky
gihskvmtklqrlagldavimpgfgdrvmtpeeevlenviectkpmgrikpclpvpggsd
saltlqtvyekvgnvdfgfvpgrgvfghpmgpkagaksirqaweaieqgisietwaethp
elqamvdqsllkkqd

    Sequence, based on observed residues (ATOM records): (download) 
    >1ykwB (B:)
edvkgffasresldmeqylvldyylesvgdietalahfcseqstfrlvhaakvidyevie
eleqlsypvkhsetgkihacrvtiahphcnfgpkipnlltavcgegtyftpgvpvvklmd
ihfpdtyladfegpkfgieglrdilnahgrpiffgvvkpnlspgefaeiayqswlggldi
akddemladvtwssieeraahlgkarrkaeaetgepkiylanitdevdslmekhdvavrn
ganallinalpvglsavrmlsnytqvplighfpfiasfsrmekygihskvmtklqrlagl
davimpgfgdrvmtpeeevlenviectkpmgrikpclpvpggsdsaltlqtvyekvgnvd
fgfvpgrgvfghpmgpkagaksirqaweaieqgisietwaethpelqamvdq