PDB entry 1yje

View 1yje on RCSB PDB site
Description: Crystal structure of the rNGFI-B ligand-binding domain
Class: transcription
Keywords: NGFI-B, Nur77, Nuclear receptor, ligand-binding domain, novel coregulator interface, cell-specific, Structural Proteomics in Europe, SPINE, Structural Genomics, TRANSCRIPTION
Deposited on 2005-01-14, released 2005-02-22
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.246
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Orphan nuclear receptor NR4A1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Nr4a1, Hmr, Ngfib
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1yjea_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1yjeA (A:)
gsshhhhhhssglvprgshmqppdasptnlltslirahldsgpntakldyskfqelvlpr
fgkedagdvqqfydllsgsldvirkwaekipgfielspgdqdlllesaflelfilrlayr
skpgegklifcsglvlhrlqcargfgdwidnilafsrslhslgvdvpafaclsalvlitd
rhglqdprrveelqnriasclkehmaavagdpqpasclsrllgklpelrtlctqglqrif
clkledlvppppivdkifmdtlsf

    Sequence, based on observed residues (ATOM records): (download) 
    >1yjeA (A:)
nlltslirahldsgpntakldyskfqelvlprfgkedagdvqqfydllsgsldvirkwae
kipgfielspgdqdlllesaflelfilrlayrskpgegklifcsglvlhrlqcargfgdw
idnilafsrslhslgvdvpafaclsalvlitdrhglqdprrveelqnriasclkehmaav
sclsrllgklpelrtlctqglqrifclkledlvppppivdkifmdt