PDB entry 1ygc

View 1ygc on RCSB PDB site
Description: Short Factor VIIa with a small molecule inhibitor
Class: hydrolase
Keywords: inverted oxy-anion hole
Deposited on 2005-01-04, released 2005-01-18
The last revision prior to the SCOP 1.73 freeze date was dated 2005-12-13, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.188
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: Coagulation factor VII
    Species: HOMO SAPIENS
    Gene: F7
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1ygch1
  • Chain 'L':
    Compound: Coagulation factor VII
    Species: HOMO SAPIENS
    Gene: F7
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1ygcl1
  • Heterogens: CA, SO4, 905, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ygcH (H:)
    ivggkvcpkgecpwqvlllvngaqlcggtlintiwvvsaahcfdkiknwrnliavlgehd
    lsehdgdeqsrrvaqviipstyvpgttnhdiallrlhqpvvltdhvvplclpertfsert
    lafvrfslvsgwgqlldrgatalelmvlnvprlmtqdclqqsrkvgdspniteymfcagy
    sdgskdsckgdsggphathyrgtwyltgivswgqgcatvghfgvytrvsqyiewlqklmr
    seprpgvllrapfp
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >1ygcL (L:)
    icvnenggceqycsdhtgtkrscrchegyslladgvsctptveypcgkipilekrnaskp
    qgr
    

    Sequence, based on observed residues (ATOM records): (download)
    >1ygcL (L:)
    icvnenggceqycsdhtgtkrscrchegyslladgvsctptveypcgkipile